|   |
545 | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | |
|
. | . | . | . | |
|
|
. | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | |
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580 | . | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  | . | . |
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|  | . | . | . |  |  |  |  |
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|  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |
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|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
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| . |
. |
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| . |
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. |
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| . |
. |
. |
. |
. |
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| . |
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. |
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. |
. |
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. |
. |
. |
. |
. |
Query Sequence |   |
D | P | P | K | E | T | T | A | P | A | L | K | A | L | K | A | . |
. |
S | G | I | T | . |
. |
. |
V | K | I | L | T | G | D | S | E | L | V | A | A | K | V | . |
. |
. |
. |
. |
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C | H | E | V | G | L | D | A | G | E | . |
. |
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. |
Query Conservation |   |
|   |
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|   |   |   |   |   |   |
|   |   |
|   |   | . | . |
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|
|   | . | . | . |
|   |
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|   |   |   |
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|   |   |
| . | . | . | . | . | . |
|   |   |   |
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|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
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| . | . |
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| . | . | . |
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| . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |
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|   |
|
|   |   |   |
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|   |   |
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|   |   |
|   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |
Template Sequence |   |
A | A | I | R | S | E | L | K | D | K | V | A | A | L | R | E | L | Y | G | G | R | V | P | G | L | A | S | I | I | V | G | Q | R | M | D | S | K | K | Y | V | Q | L | K | H | K | A | A | A | E | V | G | M | A | S | F | N | V | E | L | P | E | D | I | S | Q | E | V | L | E | V | N | V | E | K | L | N | N | D | P | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|
|  |  |  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|
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|
|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
  |   |
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590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | |
|
. | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | |
|
. | . | . | . | . | . | . | 640 | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
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| . |
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Query Sequence |   |
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V | V | I | G | S | D | I | E | T | L | S | D | D | E | L | A | N | L | A | Q | R | . |
. |
T | T | L | F | A | R | L | T | P | M | H | K | E | R | I | V | T | L | L | K | R | E | . |
. |
G | H | V | V | G | F | M | G | D | G | I |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |
|
|
|
|   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   | . | . |
|   |   |
|
|
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|
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|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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| . | . |
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|
|
| . | . |
|
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|
|
Template Conservation |   |
|   |
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|   |
|
|
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|
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
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|   |
|
|   |   |
|
|   |   |   |   |
|   |
|   |
|
|   |
|   |
|
|
|
|
|   |
Template Sequence |   |
C | H | G | I | I | V | Q | L | P | L | P | K | H | L | N | E | N | R | A | I | E | K | I | H | P | H | K | D | A | D | A | L | L | P | V | N | V | G | L | L | H | Y | K | G | R | E | P | P | F | T | P | C | T | A | K | G | V | I | V | L | L | K | R | C | G | I | E | M | A | G | K | R | A | V | V | L | G | R | S | N |
Template Known Secondary structure |   |
|
|  |  |  |  |
| S |
|
|
| T | T | S |
|  |  |  |  |  |  | T | S |
| T | T | T | B | T | T |
|
| S |  |  |  |  |  |  |  |  | S | T | T |
|
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T |
|  |  |  |  |  |
|
|
| T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |
|
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|
|
Template SS confidence |   |
|
|
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|
|
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  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
  |   |
644 | |
|
|
|
. | . | . | . | . | 650 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . |
Predicted Secondary structure |   |
| . | . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
| . |
. |
. |
. |
|
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|
|
|
|
|
|
|
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|
|
| . |
. |
. |
. |
. |
. |
|
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|
|
Query Sequence |   |
N | . |
. |
. |
. |
D | A | P | A | L | R | A | A | D | I | G | I | S | V | . |
. |
. |
. |
. |
. |
D | G | A | V | D | I | A | R | E | A | A | D | I | I | L | L |
Query Conservation |   |
| . | . | . | . |
|   |   |
|
|
|   |
|
|
|
|
|
|
| . | . | . | . | . | . |
|   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |
Alig confidence |   |
| . | . | . | . |
|
|
|
|
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|
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|
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|
|
|
|
| . | . | . | . | . | . |
|
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|
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|
|
|
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|
|
Template Conservation |   |
  |
|
|   |
|
|
|   |
|
|   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
Template Sequence |   |
I | V | G | A | P | V | A | A | L | L | M | K | E | N | A | T | V | T | I | V | H | S | G | T | S | T | E | D | M | I | D | Y | L | R | T | A | D | I | V | I | A |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
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|
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|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
  |