Job Description P0ABB8 Confidence 100.00% Date Thu Jan 5 11:15:07 GMT 2012 Rank 7 Aligned Residues 567 % Identity 24% Template c3rfuC_ PDB info PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase Resolution 3.20 Å

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		88	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure														.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	W	W	V	H	L	W	V	C	Y	R	N	.	.	.	P	F	N	I	L	L	T	I	L	G	A	I	S	Y	A	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	F	A	A	G	V	I	A	L	M	V	A	I	S	T	L	L	N	F	I	Q	E	A	R
Query Conservation														.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	F	K	R	G	W	Q	S	L	K	T	G	Q	L	N	M	F	T	L	I	A	M	G	I	G	V	A	W	I	Y	S	M	V	A	V	L	W	P	G	V	F	P	H	A	F	R	S	Q	E	G	V	V	A	V	Y	F	E	A	A	A	V	I	T	T	L	V	L	L	G	Q	V	L	E	L	K	A	R	E	Q
Template Known Secondary structure												T	T	S																										G	G	G	S		S	S	S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	K	A	A	D	A	L	K	A	M	V	S	N	T	A	T	V	L	R	V	I	N	D	K	G	E	N	G	W	L	E	I	P	I	D	Q	L	V	P	G	D	I	I	K	L	A	A	G	D	M	I	P	A	D	L	R	I	L	Q	A	R	D	L	F	V	A	Q	A	S	L	T	G	E	S	L	P	V	E	K
Query Conservation
Alig confidence																							.	.	.	.	.																																					.
Template Conservation																							.	.	.	.	.																																					.
Template Sequence		T	G	S	A	I	R	A	L	L	K	L	V	P	E	S	A	H	R	I	K	E	.	.	.	.	.	D	G	S	E	E	E	V	S	L	D	N	V	A	V	G	D	L	L	R	V	R	P	G	E	K	I	P	V	D	G	E	V	Q	E	G	R	.	S	F	V	D	E	S	M	V	T	G	E	P	I	P	V	A	K
Template Known Secondary structure			S	S						T												T	.	.	.	.	.	T								T	T	T			T	T							S	S					S						S	S		.						S	S	S	T	T		S	S
Template Predicted Secondary structure																							.	.	.	.	.																																					.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.						.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	T	T	R	Q	P	E	H	S	N	P	L	E	C	D	T	L	C	F	M	G	T	T	V	V	S	G	T	A	Q	A	M	V	I	A	T	G	A	N	T	W	F	G	Q	L	A	G	R	V	S	E	Q	E	S	E	P	N	A	F	Q	Q	G	I	S	R	V	S	M	L	L	I	R	F	M	L	V	M	A	P
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	S	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	G	A	T	I	N	Q	T	G	S	F	V	M	K	A	L	H	V	G	S	D	T	M	L	A	R	I	V	Q	M	V	S	D	A	Q	R	S	R	A	P	I	Q	R	L	A	D	T	V	S	G	W	F	V	P	A	V	I	L	V	A	V
Template Known Secondary structure			T	T			.	.	.	.	.	.	.	.	.	.	.	.	.			T	T					S											S	T	T	S														S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		286	.	.	.	290														.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		302	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		V	V	L	L	I	N	G	Y	T	K	G	D	.	.	W	W	E	A	A	L	F	A	L	S	V	A	V	G	L	T	P	E	M	L	P	M	I	V	T	S	T	L	A	R	G	A	V	K	L	S	K	Q	K	V	I	V	K	H	L	D	A	I	Q	N	F	G	A	M	D	I	L	C	T	D	K	T	G	T	L	T
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		L	S	F	I	V	W	A	L	L	G	P	Q	P	A	L	S	Y	G	L	I	A	A	V	S	V	L	I	I	A	C	P	C	A	L	G	L	A	T	P	M	S	I	M	V	G	V	G	K	G	A	Q	S	G	V	L	I	K	N	A	E	A	L	E	R	M	E	K	V	N	T	L	V	V	D	K	T	G	T	L	T
Template Known Secondary structure												S	S	S	S	T	T																S	T																			T	T				S									T	S									B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	K	I	V	L	E	N	H	T	D	I	S	G	K	T	S	E	R	V	L	H	S	A	W	L	N	S	H	Y	Q	T	G	L	K	N	L	L	D	T	A	V	L	E	G	T	D	E	E	S	A	R	S	L	A	S	R	W	Q	K	I	D	E	I	P	F	D	F	E	R	R	R	M	S	V	V	V	A	E	N
Query Conservation
Alig confidence													.													.	.	.																									.	.	.	.	.																					.	.	.	.
Template Conservation													.													.	.	.																									.	.	.	.	.																					.	.	.	.
Template Sequence		E	G	H	P	K	L	T	R	I	V	T	.	D	D	F	V	E	D	N	A	L	A	L	A	.	.	.	A	A	L	E	H	Q	S	E	H	P	L	A	N	A	I	V	H	A	A	K	E	K	G	L	.	.	.	.	.	S	L	G	S	V	E	A	F	E	A	P	T	G	K	G	V	V	G	Q	V	.	.	.	.
Template Known Secondary structure			S	S									.	S	S	S										.	.	.						S	S														T	T			.	.	.	.	.						S						T	T	T						S	.	.	.	.
Template Predicted Secondary structure													.													.	.	.																									.	.	.	.	.																					.	.	.	.
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.	.	.				.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.						480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	H	H	Q	L	V	C	K	G	A	L	Q	E	I	L	N	V	C	S	Q	V	R	H	N	G	E	I	V	P	L	D	D	I	M	L	R	K	I	K	R	V	T	D	T	L	N	R	Q	G	L	R	V	V	A	V	A	T	K	Y	L	P	A	R	E	G	D	Y	Q	R	A	D	E	S	D	L	I	L	E	G
Query Conservation
Alig confidence		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	D	G	H	H	V	A	I	G	N	A	R	L	M	Q	E	H	G	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	P	L	F	E	K	A	D	E	L	R	G	K	G	A	S	V	M	F	M	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	K	T	V	A
Template Known Secondary structure		.	.	S	S	S						S											.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.															.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.																	.	.	.	.	.	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	A	F	L	D	P	P	K	E	T	T	A	P	A	L	K	A	L	K	A	S	G	I	T	V	K	I	L	T	G	D	S	E	L	V	A	A	K	V	C	H	E	V	G	L	D	A	G	E	V	V	I	G	S	D	I	E	T	L	S	D	D	E	L	A	N	L	A	Q	R	T	T	L	F	A	R	L	T	P
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	V	V	E	D	P	I	K	S	S	T	P	E	T	I	L	E	L	Q	Q	S	G	I	E	I	V	M	L	T	G	D	S	K	R	T	A	E	A	V	A	G	T	L	G	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	V	A	E	I	M	P
Template Known Secondary structure									B		S	S												T								S	S													T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.																										.	.	.	.	.	600	.	.
		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	K	E	R	I	V	T	L	L	K	R	E	G	H	V	V	G	F	M	G	D	G	I	N	D	A	P	A	L	R	A	A	D	I	G	I	S	V	D	G	A	V	D	I	A	R	E	A	A	D	I	I	L	L	E	K	S	L	M	V	L	E	E	G	V	I	E	G	R	R	T	F	A	N	M	L	K	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	K	S	R	I	V	S	E	L	K	D	K	G	L	I	V	A	M	A	G	D	G	V	N	D	A	P	A	L	A	K	A	D	I	G	I	A	M	G	T	G	T	D	V	A	I	E	S	A	G	V	T	L	L	H	G	D	L	R	G	I	A	K	A	R	R	L	S	E	S	T	M	S	N	I	R	Q	N	L
Template Known Secondary structure															S									S	S	T	T							S	S						S	S	S		S							S					S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.
		700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	T	A	S	S	N	F	G	N	V	F	S	V	L	V	A	S	A	F	L	P	F	L	P	M	L	P	L	H	L	L	I	Q	N	L	L	Y	D	V	S	Q	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	A	F	I	Y	N	V	L	G	V	P	L	A	A	G	V	L	Y	P	L	T	G	L	L	L	S	P	M	I	A	A	A	A	M	A	L	S	S	V	S	V	I	I
Template Known Secondary structure																	T	S	S	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		683	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.