|   |
545 | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | |
. | . | . | |
|
|
. | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | |
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580 | . | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |
| . |
|
|  | . | . | . |  |  |  |  |
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|  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |
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|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
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| . |
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| . |
. |
. |
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| . |
. |
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. |
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| . |
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. |
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. |
. |
Query Sequence |   |
D | P | P | K | E | T | T | A | P | A | L | K | A | L | K | A | S | . |
G | I | T | . |
. |
. |
V | K | I | L | T | G | D | S | E | L | V | A | A | K | V | . |
. |
. |
. |
. |
. |
C | H | E | V | G | L | D | A | G | E | . |
. |
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. |
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. |
Query Conservation |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |
| . |
|
|   | . | . | . |
|   |
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|   |   |   |
|
|   |   |
| . | . | . | . | . | . |
|   |   |   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
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| . |
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| . | . | . |
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| . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
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|
|   |
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|   |
|   |
|
|   |   |
|
|   |   |
|   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |
|
Template Sequence |   |
K | D | L | K | E | R | L | A | T | Q | V | Q | E | Y | K | H | H | T | A | I | T | P | K | L | V | A | I | I | V | G | N | D | P | A | S | K | T | Y | V | A | S | K | E | K | A | C | A | Q | V | G | I | D | S | Q | V | I | T | L | P | E | H | T | T | E | S | E | L | L | E | L | I | D | Q | L | N | N | D | S | S | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
  |   |
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590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | |
610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | |
|
. | . | . | . | . | . | . | 640 | . | . | . | . | |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |
|
|
|
| . |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
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| . |
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| . |
. |
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| . |
Query Sequence |   |
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V | V | I | G | S | D | I | E | T | L | S | D | D | E | L | A | N | L | A | Q | . |
R | T | T | L | F | A | R | L | T | P | M | H | K | E | R | I | V | T | L | L | K | R | E | . |
. |
G | H | V | V | G | F | M | G | D | G | I | N | . |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   | . |   |   |   |
|
|
|
|   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   | . | . |
|   |   |
|
|
|
|
|
|
|   |
| . |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|
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| . |
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|
| . | . |
|
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|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|   |
|
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|
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|
|   |   |   |   |
|   |
|   |
|
|   |
|
|
|
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|
|
|   |   |
|
Template Sequence |   |
H | A | I | L | V | Q | L | P | L | P | A | H | I | N | K | N | N | V | I | Y | S | I | K | P | E | K | D | V | D | G | F | H | P | T | N | V | G | R | L | Q | L | R | D | K | K | C | L | E | S | C | T | P | K | G | I | M | T | M | L | R | E | Y | G | I | K | T | E | G | A | Y | A | V | V | V | G | A | S | N | V | V |
Template Known Secondary structure |   |
|  |  |  |  |
| S |
|
|
| T | T | S |
|  |  |  |  |  |  |  | S |
| G | G | G | B | T | T | S |
| S |  |  |  |  |  |  |  |  | T | T |
| T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T |
|  |  |  |  |  |
|
|
| T | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
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|
|  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|
|
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|
Template SS confidence |   |
|
|
|
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  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
  |
  |   |
|
|
|
645 | . | . | . | . | 650 | . | . | . | . | . | . | . | . | |
|
|
|
. | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
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|
Query Sequence |   |
. |
. |
. |
D | A | P | A | L | R | A | A | D | I | G | I | S | V | . |
. |
. |
. |
D | G | A | V | D | I | A | R | E | A | A | D | I | I | L | L |
Query Conservation |   |
. | . | . |
|   |   |
|
|
|   |
|
|
|
|
|
|
| . | . | . | . |
|   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
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|
|
|
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|
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|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|
|   |   |   |   |
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
Template Sequence |   |
G | K | P | V | S | Q | L | L | L | N | A | K | A | T | V | T | T | C | H | R | F | T | T | D | L | K | S | H | T | T | K | A | D | I | L | I | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| T | T |
| S | S |  |  |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
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|
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|
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|
|
|
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|
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|
|
|
|
|
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
  |