Job Description P0ABB8 Confidence 40.03% Date Thu Jan 5 11:15:07 GMT 2012 Rank 239 Aligned Residues 90 % Identity 8% Template c2wwbA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome Resolution 6.48 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		L	W	K	T	F	D	T	H	P	E	G	L	N	Q	A	E	V	E	S	A	R	E	Q	H	G	.	.	.	E	N	K	L	P	A	Q	Q	P	S	P	W	W	V	H	L	W	V	C	Y	R	N	P	F	N	I	L	L	T	I	L	G	A	I	S	Y	A	T	E	D	L	F	A	A	G	V	I	A	L	M	V	A
Query Conservation																											.	.	.
Alig confidence																											.	.	.											.
Template Conservation																																								.
Template Sequence		F	F	S	K	T	W	I	E	V	S	G	S	S	A	K	D	V	A	K	Q	L	K	E	Q	Q	M	V	M	R	G	H	R	E	T	S	M	V	H	.	E	L	N	R	Y	I	P	T	A	A	A	F	G	G	L	C	I	G	A	L	S	V	L	A	D	F	L	G	A	I	G	S	G	T	G	I	L	L	A	V	T
Template Known Secondary structure								T	T	T	S	S															T	T	T					T	T	T	T	T		.																														S	S
Template Predicted Secondary structure																																								.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	T	L	L	N	F	I	Q	E	A	R	S	T	K	A
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		I	I	.	.	Y	Q	Y	F	E	I	F	V	K	E	Q	S
Template Known Secondary structure				.	.												T
Template Predicted Secondary structure				.	.
Template SS confidence
		453	.			.	.	.	.	.	460	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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