Job Description P0ABB8 Confidence 99.16% Date Thu Jan 5 11:15:07 GMT 2012 Rank 43 Aligned Residues 143 % Identity 24% Template c2qyhD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical conserved protein, gk1056; PDBTitle: crystal structure of the hypothetical protein (gk1056) from2 geobacillus kaustophilus hta426 Resolution 2.60 Å

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		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.										.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query Sequence		D	P	P	K	E	T	T	A	P	A	L	K	A	L	K	A	S	G	I	T	V	K	I	L	T	G	D	S	E	L	V	A	A	K	V	C	H	E	V	G	L	D	A	G	E	V	V	I	G	S	D	I	.	.	.	.	.	.	.	.	.	E	T	L	S	D	D	E	L	A	N	L	A	Q	R	.	.	.	.	.
Query Conservation																																																						.	.	.	.	.	.	.	.	.															.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation
Template Sequence		K	Q	L	P	L	S	T	I	E	A	V	R	R	L	K	Q	S	G	V	Y	V	A	I	A	T	G	R	A	P	F	X	F	E	H	V	R	K	Q	L	G	I	D	S	F	V	S	F	N	G	Q	Y	V	V	F	E	G	N	V	L	Y	K	Q	P	L	R	R	E	K	V	R	A	L	T	E	E	A	H	K	N	G
Template Known Secondary structure		S																T	T								S	S		G	G	G	S								T							G	G	G	T					T	T																							T	T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
																																																																														611	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	L	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	P	L	V	F	X	D	A	E	K	X	R	A	S	I	G	D	H	P	H	I	H	V	S	X	A	S	L	K	F	A	H	P	P	V	D	P	L	Y	Y	E	N	K	D	I	Y	Q	A	L	L	F	C	R	A	E	E	E	E	P	Y	V	R	N	Y	P	E	F	R	F	V	R	W	H	D	V	S	T	D	V	L
Template Known Secondary structure									S	S					S	S	T	T										T	T	T						B		T	T					S			S								T	T	T									T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		615	.	.	.	.	620	.	.	.	.	.			.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		A	R	L	T	P	M	H	K	E	R	I	.	.	V	T	L	L	K	R	E	G	H	V	V	G	F	M	G	D	G	I	N	D	A	P	A	L	R	A	A	D	I	G	I	S	V	D	G	A	V	D	I	A	R	E	A	A	D	I	I	L	L	E	K	S	L	M	V	L	E	E	G	V	I	E
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		P	A	G	G	S	K	A	E	G	I	R	X	X	I	E	K	L	G	I	D	K	K	D	V	Y	A	F	G	D	G	L	N	D	I	E	X	L	S	F	V	G	T	G	V	A	X	G	N	A	H	E	E	V	K	R	V	A	D	F	V	T	K	P	V	D	K	E	G	I	W	Y	G	L	K	Q
Template Known Secondary structure			T	T															T			G	G	G							S	G	G	G							S	S						T	T										S						G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions