 |
Job Description | P0ABB8 | Confidence | 95.36% | Date | Thu Jan 5 11:15:07 GMT 2012 |
Rank | 111 | Aligned Residues | 126 |
% Identity | 14% | Template | c2hoqA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:putative had-hydrolase ph1655; |
PDBTitle: crystal structure of the probable haloacid dehalogenase (ph1655) from2 pyrococcus horikoshii ot3
|
Resolution | 1.70 Å |
|
 |
  |   |
546 | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | P | K | E | T | T | A | P | A | L | K | A | L | K | A | S | G | I | T | V | K | I | L | T | G | D | S | E | L | V | A | A | K | V | C | H | E | V | G | L | D | A | G | E | V | V | I | G | S | D | I | E | T | L | S | D | D | E | L | A | N | L | A | Q | R | T | T | L | F | A | R | L | T | P | M | H | K | E | R | I |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |
|
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
R | E | V | P | G | A | R | K | V | L | I | R | L | K | E | L | G | Y | E | L | G | I | I | T | D | G | N | P | V | K | Q | W | E | K | I | L | R | L | E | L | D | D | F | F | E | H | V | I | I | S | D | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | G | V | K | K | P | H | P | K | I | F | K | K | A |
Template Known Secondary structure |   |
| B |
| T | T |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G |
| S |  |  |  |  | G | G | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | T |
|
| T | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
626 | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | |
. | . | . | . | . | . | 650 | . | . | . | |
|
|
. | . | . | . | . | . | 660 | . | . | . | . | |
|
|
. | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |
|
| . | . | . |  |  |  |  |  |
|
|
|  |  |  | . | . | . |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | T | L | L | K | R | E | G | H | V | V | G | F | M | G | D | G | I | . |
N | D | A | P | A | L | R | A | A | D | . |
. |
. |
I | G | I | S | V | D | G | A | V | D | I | . |
. |
. |
A | R | E | A | A | D | I | I | L | L | E | K | S | L | M | V | L | E | E | G | V | I | E |
Query Conservation |   |
|   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|   | . |
|
|   |   |
|
|
|   |
|
| . | . | . |
|
|
|
|
|
|   |
|
|   |   | . | . | . |
|   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| . | . |   |   |
|   |
|
|   |   |   |
|   |   |
Template Sequence |   |
L | K | A | F | N | V | K | P | E | E | A | L | M | V | G | D | R | L | Y | S | D | I | Y | G | A | K | R | V | G | M | K | T | V | W | F | R | Y | G | K | H | S | E | R | E | L | E | Y | R | K | Y | A | D | Y | E | I | . |
. |
D | N | L | E | S | L | L | E | V | L | A | R |
Template Known Secondary structure |   |
 |  |  |  | T |
|
| G | G | G |  |  |  |  |  | S |
| T | T | T | T |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
| S |
|
|
|  |  |  |  | T | T | G | G | G |
| S |  |  |  | . | . | S | S | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
|
. | . | . | . | . | 220 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|