Job Description P0ABB8 Confidence 99.87% Date Thu Jan 5 11:15:07 GMT 2012 Rank 23 Aligned Residues 112 % Identity 26% Template c2hc8A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cation-transporting atpase, p-type; PDBTitle: structure of the a. fulgidus copa a-domain Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	D	A	L	K	A	M	V	S	N	T	A	T	V	L	R	V	I	N	D	K	G	E	N	G	W	L	E	I	P	I	D	Q	L	V	P	G	D	I	I	K	L	A	A	G	D	M	I	P	A	D	L	R	I	L	Q	A	R	D	L	F	V	A	Q	A	S	L	T	G	E	S	L	P	V	E	K	A	A
Query Conservation
Alig confidence																				.	.	.	.	.	.																																					.
Template Conservation																				.	.	.	.	.	.																																					.
Template Sequence		E	A	I	K	K	L	V	G	L	Q	A	K	T	A	V	V	I	R	.	.	.	.	.	.	D	G	K	E	I	A	V	P	V	E	E	V	A	V	G	D	I	V	I	V	R	P	G	E	K	I	P	V	D	G	V	V	V	E	G	E	.	S	Y	V	D	E	S	M	I	S	G	E	P	V	P	V	L	K	S	K
Template Known Secondary structure											S		S							.	.	.	.	.	.	T	T							G	G	G			T	T							T	T		B			S									.												S	S						T
Template Predicted Secondary structure																				.	.	.	.	.	.																																					.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.							.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	R	Q	P	E	H	S	N	P	L	E	C	D	T	L	C	F	M	G	T	T	V	V	S	G	T	A	Q	A	M	V	I	A	T	G	A	N	T	W	F	G	Q	L	A	G	R	V	S	E	Q	E
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	G	A	T	I	N	N	T	G	V	L	K	I	R	A	T	R	V	G	G	E	T	L	L	A	Q	I	V	K	L	V	E	D	A	M
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.	.	.	.	.			T	T					S	S										G	G	G	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.														290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions