Job Description P0ABB8 Confidence 22.86% Date Thu Jan 5 11:15:07 GMT 2012 Rank 357 Aligned Residues 134 % Identity 19% Template c1bf5A_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: tyrosine phosphorylated stat-1/dna complex Resolution 2.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure															.	.																																												.
Query SS confidence															.	.																																												.
Query Sequence		I	F	T	R	L	I	R	H	L	P	S	R	L	.	.	V	H	R	D	P	L	P	G	A	Q	Q	T	V	N	T	V	V	P	P	S	L	S	A	H	C	L	K	M	A	V	M	P	E	E	E	L	W	K	T	F	D	T	H	.	P	E	G	L	N	Q	A	E	V	E	S	A	R	E	Q	H	G	E	N	K	L
Query Conservation															.	.																																												.
Alig confidence															.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.							.												.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.							.
Template Sequence		L	W	Y	N	M	L	V	A	E	P	R	N	L	S	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	P	P	C	.	.	.	.	.	A	R	W	A	Q	L	.	S	E	V	L	S	W	Q	F	S	S	V	T	K	R	G	L	N	V	D	Q	L	N	M	L	G	E	K	L	L	G	P	N	A
Template Known Secondary structure										S	S			T	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S				.	.	.	.	.							.												S	S																T		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.							.
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.															.	.	490	.	.						.	.	.	.	.	.		.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																				.																.	.	.	.
Query SS confidence																				.																.	.	.	.
Query Sequence		P	A	Q	Q	P	S	P	W	W	V	H	L	W	V	C	Y	R	N	.	P	F	N	I	L	L	T	I	L	G	A	I	S	Y	A	.	.	.	.	T	E	D	L	F	A	A	G	V	I	A	L	M	V	A	I	S	T	L	L	N	F	I	Q	E	A	R	S	T	K	A	A	D	A	L	K	A	M	V	S	N	T
Query Conservation																				.																.	.	.	.
Alig confidence																				.																.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	D	G	L	I	P	W	T	R	F	C	K	E	N	I	N	D	K	N	F	P	F	W	L	W	I	E	S	I	L	E	L	I	K	K	H	L	L	P	L	W	N	D	G	C	I	M	G	F	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	R	E	R	A	L	L	K	D	Q	Q	P	G
Template Known Secondary structure			T	T										T	S			T	T	S	S	S																	T						T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T			S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.															.	.	.	.	.	.	590	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	V	L	R	V	I	N	D	K	G	E	N	G	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	L	L	R	F	S	E	S	S	R	E	G	A	I	T
Template Known Secondary structure									S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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