 |
Job Description | P09184 | Confidence | 14.09% | Date | Thu Jan 5 11:02:09 GMT 2012 |
Rank | 47 | Aligned Residues | 47 |
% Identity | 19% | Template | c2p14A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:heterodimeric restriction endonuclease r.bspd6i small |
PDBTitle: crystal structure of small subunit (r.bspd6i2) of the heterodimeric2 restriction endonuclease r.bspd6i
|
Resolution | 1.50 Å |
|
 |
  |   |
17 | . | . | 20 | . | . | . | . | |
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 50 | . | . | . | . | |
|
. | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  | . | . |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | T | R | D | T | A | I | . |
. |
. |
E | K | R | L | A | S | L | L | T | G | Q | G | L | A | F | R | V | Q | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | S | L | P | G | R | P | D | F | V | V | . |
. |
D | E | Y | R | C | V | I | F | T |
Query Conservation |   |
|
|   |   |
|
|   |
| . | . | . |
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |
|
|
|
|   | . | . |   |   |   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |
|
|
|
|
Template Sequence |   |
V | E | K | T | I | N | P | P | N | Y | F | E | W | N | T | Y | R | V | F | K | K | L | G | S | Y | K | N | L | V | P | N | F | K | L | D | D | S | G | H | P | I | G | N | A | I | P | G | V | E | D | I | L | V | E | Y | E | H | F | S | I | L | I | E | C |
Template Known Secondary structure |   |
G | G | G | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S |  |  |  |  | S | S |  |  |
| T | T | S |
|  |  |  |
|
|
| T | T | S |
| S |  |  |  |  |
| S | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|