Job Description P09184 Confidence 29.42% Date Thu Jan 5 11:02:09 GMT 2012 Rank 18 Aligned Residues 71 % Identity 11% Template c1fokA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:protein (foki restriction endonucleas); PDBTitle: structure of restriction endonuclease foki bound to dna Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																.																										.	.	.	.
Query SS confidence																.																										.	.	.	.
Query Sequence		D	T	A	I	E	K	R	L	A	S	L	L	T	G	.	Q	G	L	A	F	R	V	Q	D	A	S	L	P	G	R	P	D	F	V	V	D	E	Y	R	C	.	.	.	.	V	I	F	T	H	G	C	F	W	H	H	H	H	C	Y	L	F	K	V	P	A	T	R	T	E	F	W	L	E	K	I	G	K	N	V	E
Query Conservation																.																										.	.	.	.
Alig confidence																.											.	.														.	.	.	.												.	.	.	.
Template Conservation																											.	.																													.	.	.	.
Template Sequence		D	R	I	L	E	M	K	V	M	E	F	F	M	K	V	Y	G	Y	R	G	K	H	L	G	G	.	.	S	R	K	P	D	G	A	I	Y	T	V	G	S	P	I	D	Y	G	V	I	V	D	T	K	A	Y	S	G	.	.	.	.	G	Y	N	L	P	I	G	Q	A	D	E	M	Q	R	Y	V	E	E	N	Q	T
Template Known Secondary structure																T	T									S	.	.	S	S	S		S						S	S	S	T	T												T	T	.	.	.	.																			T	T	S
Template Predicted Secondary structure																											.	.																													.	.	.	.
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.			.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.					.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
		96	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		495	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions