 |
Job Description | P76055 | Confidence | 46.18% | Date | Thu Jan 5 12:17:55 GMT 2012 |
Rank | 124 | Aligned Residues | 85 |
% Identity | 13% | Template | d2gnpa1 |
SCOP info | NagB/RpiA/CoA transferase-like
| NagB/RpiA/CoA transferase-like
| SorC sugar-binding domain-like
|
Resolution | 1.65 |
|
 |
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
|
|
. | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | R | L | R | R | N | V | G | E | A | I | A | D | F | . |
. |
N | M | I | E | E | G | D | R | I | M | V | C | L | S | G | G | K | D | S | Y | T | M | L | E | I | L | R | N | L | Q | Q | S | A | P | I | N | F | S | L | V | A | V | N | L | D | Q | K | Q | P | G | F | P | . |
. |
. |
E | H | V | L | P | E | Y | L |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |   |   |
|   |   |   | . | . |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   | . | . |
|
|
|
|
|
|   | . | . | . |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
Template Sequence |   |
P | T | I | L | S | E | R | I | S | Q | V | A | A | G | V | L | R | N | L | I | D | D | N | X | K | . |
. |
I | G | F | S | W | G | K | . |
. |
. |
S | L | S | N | L | V | D | L | I | H | S | K | S | V | R | N | V | H | F | Y | P | L | A | G | G | P | S | H | I | H | A | K | Y | H | V | N | T | L | I | Y | E | X | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
|  | . | . |  |  |  |
|
| S |  | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
| S | S |
|  |  |  |  | S | B |
|
|
| T | T | S |
| G | G | G | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . |  |  |  |  |
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
|
. | . | . | . | . | . | . | |
|
|
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
  |
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | L | G | V | E | Y | K | I | V | E | E | N | T | Y |
Query Conservation |   |
  |   |   |
|
|   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
Template Sequence |   |
R | K | F | H | G | E | C | T | F | X | N | A | T | I | V |
Template Known Secondary structure |   |
 |  |  | T |
|  |  |
|
|
|
| S |
| S | B |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|