Job Description P76055 Confidence 60.02% Date Thu Jan 5 12:17:55 GMT 2012 Rank 104 Aligned Residues 93 % Identity 17% Template c3s3tD_ PDB info PDB header:chaperone Chain: D: PDB Molecule:nucleotide-binding protein, universal stress protein uspa PDBTitle: universal stress protein uspa from lactobacillus plantarum Resolution 1.90 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																				.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	I	M	V	C	L	S	G	G	K	D	S	Y	T	M	L	E	I	L	R	N	L	Q	Q	S	A	P	I	N	F	S	L	V	A	V	N	L	D	Q	K	Q	P	G	F	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	L	P	E	Y	L	E	K	L	G	V	E	Y
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	I	L	V	P	V	D	S	S	D	A	A	Q	A	A	F	T	E	A	V	N	I	A	Q	R	H	Q	A	N	L	T	A	L	Y	V	V	D	D	S	A	Y	H	T	P	A	L	D	P	V	L	S	E	L	L	D	A	E	A	A	H	A	K	D	A	X	R	Q	R	Q	Q	F	V	A	T	T	S	A	P	N
Template Known Secondary structure										S	S																		T																	G	G	G																												T	S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	V	E	E	N	T	Y	G	I	V	K	E	K	I	P	E	G	K	T	T	C	S	L	C	S	R	L	R	R	G	I	L	Y	R	T	A	T	E	L	G	A	T	K	I	A	L	G	H	H
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	T	E	I	S	Y	G	I	P	K	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	D	Y	A	K	Q	H	P	E	I	D	L	I	V	L	G	A	T
Template Known Secondary structure									S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	T	T								S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.																			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions