Job Description P76055 Confidence 99.42% Date Thu Jan 5 12:17:55 GMT 2012 Rank 39 Aligned Residues 176 % Identity 14% Template c3q4gA_ PDB info PDB header:ligase Chain: A: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: structure of nad synthetase from vibrio cholerae Resolution 2.40 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.
Query Sequence		K	E	Q	Y	N	L	N	K	L	Q	K	R	L	R	R	N	V	G	E	A	I	A	D	F	N	M	I	E	E	G	D	R	I	M	V	C	L	S	G	G	K	D	S	Y	T	M	L	E	I	L	R	N	L	Q	Q	S	.	.	.	.	.	A	P	I	N	F	S	L	V	A	V	N	L	D	Q	K	Q	P	G	F
Query Conservation																																																										.	.	.	.	.
Alig confidence																												.	.	.	.																											.	.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		L	P	S	I	D	P	Q	F	E	I	E	R	R	V	A	F	I	K	R	K	L	T	E	A	R	Y	.	.	.	.	K	S	L	V	L	G	I	S	G	G	V	D	S	T	T	C	G	R	L	A	Q	L	A	V	E	E	L	N	Q	Q	H	N	T	T	E	Y	Q	F	I	A	V	R	L	P	Y	G	E	Q	K	D
Template Known Secondary structure			S	S																						T		.	.	.	.									S	S																					T	T		S											S	S	S		S
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.												.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query Sequence		P	E	H	V	L	P	E	Y	L	E	K	L	G	V	E	Y	K	I	V	E	E	N	.	.	.	.	.	.	.	.	.	.	.	T	Y	G	I	V	K	E	K	I	P	E	G	K	T	T	C	S	L	C	S	.	.	.	.	.	R	L	R	R	G	I	L	Y	R	T	A	T	E	L	G	A	T	K	I	A	L	G
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation
Template Sequence		E	D	E	A	Q	L	A	L	S	F	I	R	P	T	H	S	V	S	V	N	I	K	A	G	V	D	G	L	H	A	A	S	H	H	A	L	A	N	T	G	L	I	P	S	D	P	A	K	V	D	F	I	K	G	N	V	K	A	R	A	R	X	V	A	Q	Y	E	I	A	G	Y	V	G	G	L	V	L	G	T	D
Template Known Secondary structure															S																										T		S		S	S																												T				B
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	R	D	D	I	L	Q	T	L	F	L	N	M	F	Y	G	G	K	M	K	G	M	P	P	K	L	M	S	D	D	G	K	H	I	V	I	R	P	L	A	Y	C	R	E	K	D	I	Q	R	F	A	D	A	K	A	F	P
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	A	E	N	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	Y	T	K	F	G	D	G	A	C	D	L	A	P	L	F	G	L	N	K	R	Q	V	R	L	L	A	K	T	L	G	A	P
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S		T	T	T	T	T			S	B		T	T	T	T													T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.																		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions