Job Description P76055 Confidence 99.95% Date Thu Jan 5 12:17:55 GMT 2012 Rank 9 Aligned Residues 174 % Identity 20% Template c3k32D_ PDB info PDB header:transferase Chain: D: PDB Molecule:uncharacterized protein mj0690; PDBTitle: the crystal structure of predicted subunit of trna2 methyltransferase from methanocaldococcus jannaschii dsm Resolution 2.50 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		I	M	V	C	L	S	G	G	K	D	S	Y	T	M	L	E	I	L	R	N	L	Q	Q	S	A	P	I	N	F	S	L	V	A	V	N	L	D	Q	K	Q	P	G	F	P	E	H	V	L	P	E	Y	L	E	K	L	G	V	E	Y	K	I	V	E	E	N	T	Y	.	.	G	I	V	K	E	K	I	P	E	G	K
Query Conservation																																																																					.	.
Alig confidence																							.	.	.	.	.	.																	.																								.	.
Template Conservation																							.	.	.	.	.	.																	.
Template Sequence		V	H	V	L	F	S	G	G	K	D	S	S	L	S	A	V	I	L	K	K	L	.	.	.	.	.	.	G	Y	N	P	H	L	I	T	I	N	F	G	V	I	P	S	.	Y	K	L	A	E	E	T	A	K	I	L	G	F	K	H	K	V	I	T	L	D	R	K	I	V	E	K	A	A	D	X	I	I	E	H	K
Template Known Secondary structure								S	S													T	.	.	.	.	.	.	T											S	S	S		T	.	T											T																								S
Template Predicted Secondary structure																							.	.	.	.	.	.																	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.							.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	C	S	L	C	S	R	L	R	R	G	I	L	Y	R	T	A	T	E	L	G	A	T	K	I	A	L	G	H	H	R	D	D	I	L	Q	T	L	F	L	N	M	F	Y	G	G	K	M	K	G	M	P	P	K	L	M	S	D	D	G	K	H	I	V	I	R	P	L	A	Y	C	R	E	K	D	I	Q	R	F
Query Conservation
Alig confidence																						.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.																															.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	G	P	A	I	Q	Y	V	H	K	T	V	L	E	I	L	A	D	E	.	.	Y	S	I	L	A	D	G	T	R	R	D	D	R	V	P	K	L	S	Y	S	E	I	Q	S	L	E	X	R	K	N	.	.	.	.	.	.	.	.	.	.	I	Q	Y	I	T	P	L	X	G	F	G	Y	K	T	L	R	H	L
Template Known Secondary structure		S	S																T	T	T	.	.		S								T	T			S	S																.	.	.	.	.	.	.	.	.	.						G	G	G	G
Template Predicted Secondary structure																						.	.																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.											.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	K	A	F	P	I	I	P	C	N	L	C	G	S	Q	P	N	L	Q	R	Q	V	I	A	D	M	L	R	D	W	D	K	R	Y	P	G
Query Conservation
Alig confidence						.					.											.
Template Conservation						.					.											.
Template Sequence		A	S	E	F	.	F	I	L	E	.	E	I	S	S	D	Y	E	A	E	I	.	R	H	I	L	K	E	R	G	E	S	P	E	K	Y	F	P	E
Template Known Secondary structure						.					.				T	T	T					.								T			G	G	G	T
Template Predicted Secondary structure						.					.											.
Template SS confidence
		147	.	.	150		.	.	.	.		.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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