Job Description P76055 Confidence 54.45% Date Thu Jan 5 12:17:55 GMT 2012 Rank 111 Aligned Residues 85 % Identity 20% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	V	C	L	S	G	G	K	D	S	Y	T	M	L	E	I	L	R	N	L	Q	Q	S	A	P	I	N	F	S	L	V	A	V	N	L	D	Q	K	Q	P	G	F	P	E	H	V	L	P	E	Y	L	E	K	L	G	V	E	Y	K	I	V	E	E	N	T	Y	G	I	V	K	E	K	I	P	E	G	K	T	T
Query Conservation
Alig confidence																										.	.	.											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	N	H	.	.	.	G	F	S	V	V	I	A	A	S	D	.	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	V	K	V	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	Y	G
Template Known Secondary structure							T	T	S	S															T	.	.	.	T										.	T	T															T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T
Template Predicted Secondary structure																										.	.	.											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	L	C	S	R	L	R	R	G	I	L	Y	R	T	A	T	E	L	G	A	T	K	I	A	L
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		A	D	P	A	A	V	A	Y	D	A	I	.	.	Q	H	A	K	A	R	G	I	D	V	V	L	I
Template Known Secondary structure													.	.							T		S
Template Predicted Secondary structure													.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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