Job Description P76055 Confidence 100.00% Date Thu Jan 5 12:17:55 GMT 2012 Rank 1 Aligned Residues 263 % Identity 16% Template c3a2kB_ PDB info PDB header:ligase/rna Chain: B: PDB Molecule:trna(ile)-lysidine synthase; PDBTitle: crystal structure of tils complexed with trna Resolution 3.65 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		L	R	R	N	V	G	E	A	I	A	D	F	N	M	I	E	E	G	D	R	I	M	V	C	L	S	G	G	K	D	S	Y	T	M	L	E	I	L	R	N	L	Q	Q	S	A	P	I	N	F	S	L	V	A	V	N	L	D	Q	K	Q	P	G	F	.	.	.	.	P	E	H	V	L	P	E	Y	L	E	K	L	G
Query Conservation																																																																	.	.	.	.
Alig confidence																																														.	.																		.	.	.	.
Template Conservation																																														.	.
Template Sequence		M	I	D	K	V	R	A	F	I	H	R	H	Q	L	L	S	E	G	A	A	V	I	V	G	V	S	G	G	P	D	S	L	A	L	L	H	V	F	L	S	L	R	D	E	.	.	W	K	L	Q	V	I	A	A	H	V	D	H	M	F	R	G	R	E	S	E	E	E	M	E	F	V	K	R	F	C	V	E	R	R
Template Known Secondary structure			T	T									T		S	S	S		S	S	B							S	S																T	.	.	T	T		B									T	T		T																	T	T
Template Predicted Secondary structure																																														.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	Y	K	I	V	E	E	N	T	Y	G	I	V	K	E	K	I	P	E	G	K	T	T	C	S	L	C	S	R	L	R	R	G	I	L	Y	R	T	A	T	E	L	G	A	T	K	I	A	L	G	H	H	R	D	D	I	L	Q	T	L	F	L	N	M	F	Y	G	G	K	M	K	G	M	P	P	K	L	M	S
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		I	L	C	E	T	A	Q	I	D	V	P	A	F	Q	R	S	.	.	.	A	G	L	G	A	Q	E	A	A	R	I	C	R	Y	R	F	F	A	E	L	M	E	K	H	Q	A	G	Y	V	A	V	G	H	H	G	D	D	Q	V	E	T	I	L	M	R	L	V	R	G	S	T	S	K	G	Y	A	G	I	P	V	K
Template Known Secondary structure											T					T	T	.	.	.	T	T			S																		T	T	T																											S	S	S	T	T		S		S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
			178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.																																																	.
Query SS confidence		.																																																	.
Query Sequence		.	D	D	G	K	H	I	V	I	R	P	L	A	Y	C	R	E	K	D	I	Q	R	F	A	D	A	K	A	F	P	I	I	P	C	N	L	C	G	S	Q	P	N	L	Q	R	Q	V	I	A	.	D	M	L	R	D	W	D	K	R	Y	P	G	R	I	E	T	M	F	S	A	M	Q	N	V	V	P	S	H	L	C
Query Conservation		.																																																	.
Alig confidence		.																																.																	.
Template Conservation																																		.
Template Sequence		R	P	F	H	G	G	Y	L	I	R	P	F	L	A	V	S	R	A	E	I	E	A	Y	C	R	Q	M	G	L	S	P	R	.	C	D	P	S	N	E	K	D	D	Y	T	R	N	R	F	R	H	H	I	V	P	L	L	R	Q	E	N	P	R	L	H	E	R	F	Q	Q	Y	S	E	M	M	A	E	D	E	Q	F
Template Known Secondary structure					S	S	S					G	G	G	G	S												T			S	S		.	S		T	T				T	T	S								T										S						T
Template Predicted Secondary structure																																		.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	N	L	F	D	F	K	G	I	T	H	G	S	E	V	V	N	G	G	D	L	A	F	D	R	E	E	I	P	L	Q	P	A	C	W	Q
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		L	E	E	L	A	.	.	A	D	A	L	N	K	V	M	E	K	Q	H	R	D	A	A	L	S	I	G	P	F	L	E	L	P	R	P	L	Q
Template Known Secondary structure							.	.						T	T				S	S	S	S											S
Template Predicted Secondary structure							.	.
Template SS confidence
		235	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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