Job Description P76055 Confidence 99.77% Date Thu Jan 5 12:17:55 GMT 2012 Rank 28 Aligned Residues 159 % Identity 21% Template c2ywcC_ PDB info PDB header:ligase Chain: C: PDB Molecule:gmp synthase [glutamine-hydrolyzing]; PDBTitle: crystal structure of gmp synthetase from thermus thermophilus in2 complex with xmp Resolution 2.20 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		K	E	Q	Y	N	L	N	K	L	Q	K	R	L	R	R	N	V	G	E	A	I	A	D	F	N	M	I	E	E	G	D	R	I	M	V	C	L	S	G	G	K	D	S	Y	T	M	L	E	I	L	R	N	L	Q	Q	S	A	P	I	N	F	S	L	V	A	V	N	L	D	Q	K	.	Q	P	G	F	P	E	H	V
Query Conservation																																																																									.
Alig confidence																							.	.	.	.	.	.	.																										.	.	.	.	.	.													.
Template Conservation																							.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		K	R	D	W	T	P	E	H	V	L	E	E	L	L	R	E	V	R	E	R	A	.	.	.	.	.	.	.	G	K	D	R	V	L	L	A	V	S	G	G	V	D	S	S	T	L	A	L	L	L	A	K	A	.	.	.	.	.	.	G	V	D	H	L	A	V	F	V	D	H	G	L	L	R	L	G	E	R	E	E
Template Known Secondary structure																							.	.	.	.	.	.	.	T	T	S								S	S													T	.	.	.	.	.	.	T											S		S		T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.								.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.							.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																					.																																			.
Query SS confidence																					.																																			.
Query Sequence		L	P	E	Y	L	E	K	L	G	V	E	Y	K	I	V	E	E	N	T	.	Y	G	I	V	K	E	K	I	P	E	G	K	T	T	C	S	L	C	S	R	L	R	R	G	I	L	Y	R	T	A	T	E	L	G	.	A	T	K	I	A	L	G	H	H	R	D	D	I	L	Q	T	L	F	L	N	M	F	Y	G	G
Query Conservation																					.																																			.
Alig confidence																					.																																			.																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	G	A	L	R	A	L	G	V	N	L	L	V	V	D	A	K	E	R	F	L	K	A	L	K	G	V	E	D	P	E	E	K	R	K	I	I	G	R	E	F	V	A	A	F	S	Q	V	A	R	E	R	G	P	F	R	F	L	A	Q	G	T	L	Y	P	D	V	I	E	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T																	T	T																										S				S														.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	K	G	M	P	P	K	L	M	S	D	D	G	K	H	I	V	I	R	P	L	A	Y	C	R	E	K	D	I	Q	R	F	A	D	A	K	A	F	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	L	L	E	P	F	R	L	L	F	K	D	E	V	R	E	L	A	L	L	L	G	L	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T	T													T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions