 |
Job Description | P76055 | Confidence | 55.43% | Date | Thu Jan 5 12:17:55 GMT 2012 |
Rank | 108 | Aligned Residues | 82 |
% Identity | 11% | Template | c2px0D_ |
PDB info |
PDB header:biosynthetic protein | Chain: D: PDB Molecule:flagellar biosynthesis protein flhf; |
PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+)
|
Resolution | 3.00 Å |
|
 |
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | K | R | L | R | R | N | V | G | E | A | I | A | D | F | N | M | I | E | E | G | D | R | . |
. |
. |
. |
I | M | V | C | L | S | G | G | K | D | S | Y | T | M | L | E | I | L | R | N | L | Q | Q | S | A | P | I | N | F | S | L | V | A | V | N | L | D | Q | K | Q | P | G | F | P | E | H | V | L | P | E | Y | L |
Query Conservation |   |
  |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
| . | . | . |   |   |
|   |   |
|   |
|
|
|   |   |   |
|
Template Sequence |   |
V | V | G | K | L | Q | E | I | L | C | D | M | L | P | S | A | D | K | W | Q | E | P | I | H | S | K | Y | I | V | L | F | G | S | T | G | A | G | K | T | T | T | L | A | K | L | A | A | I | S | M | L | E | K | H | K | K | I | A | F | I | T | T | D | . |
. |
. |
T | Y | R | I | A | A | V | E | Q | L | K | T | Y | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | S |
|
| S | T | T | S |
|
|
| S |
| S | S | B |
|
|  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
|  |  |  |  |  |  |
| . | . | . |
| S | S | T | T | T | T |  |  |  |  | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
|
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
  |
  |   |
94 | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | L | G | V | E | Y | K | I |
Query Conservation |   |
  |   |   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |   |
Template Sequence |   |
E | L | L | Q | A | P | L | E | V |
Template Known Secondary structure |   |
 |  | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
228 | . | 230 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|