Job Description P76055 Confidence 30.68% Date Thu Jan 5 12:17:55 GMT 2012 Rank 153 Aligned Residues 142 % Identity 18% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.									.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.
Query Sequence		N	Q	Q	I	T	K	K	E	Q	Y	N	L	N	K	L	Q	K	R	L	R	R	N	V	G	E	A	I	A	D	F	.	.	.	.	.	.	.	.	N	M	I	E	E	G	D	R	I	M	V	C	L	S	G	G	K	D	S	Y	T	M	L	E	I	L	R	N	L	Q	Q	S	A	P	I	N	F	S	L	V	A	V
Query Conservation																																.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		R	E	E	A	L	G	K	Q	V	L	E	S	L	T	P	A	E	V	I	L	A	T	V	Y	E	A	L	K	E	A	L	G	G	E	A	R	L	P	V	L	K	D	R	N	L	W	F	L	V	G	L	Q	G	S	G	K	T	T	T	A	A	K	L	A	L	Y	Y	K	G	K	.	.	.	G	R	R	P	L	L	V
Template Known Secondary structure								T	T	T	T	T		S																		T	T	S	S								S	S								S	T	T	S	S														T	T	.	.	.	T
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		N	L	D	Q	K	Q	P	G	F	P	E	H	V	L	P	E	Y	L	E	K	L	G	V	E	Y	K	I	V	E	E	N	T	Y	G	I	V	K	E	K	I	P	E	G	K	T	T	C	S	L	C	S	R	L	R	R	G	I	L	Y	R	T	A	T	E	L	G	A	T	K	I	A	L	G	H	.	.	H	R	D	D
Query Conservation																																																																												.	.
Alig confidence							.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation							.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	D	T	Q	.	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	D	G	E	S	P	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T	A	G	R	L	Q	I	D	E
Template Known Secondary structure						S	.	S	T	T													T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T																	T	T													T	T
Template Predicted Secondary structure							.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	Q	T	L	F	L	N	M	F	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	M	G	E	L	A	R	L	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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