Job Description P76055 Confidence 100.00% Date Thu Jan 5 12:17:55 GMT 2012 Rank 2 Aligned Residues 261 % Identity 18% Template c2e21A_ PDB info PDB header:ligase Chain: A: PDB Molecule:trna(ile)-lysidine synthase; PDBTitle: crystal structure of tils in a complex with amppnp from aquifex2 aeolicus. Resolution 2.70 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		L	Q	K	R	L	R	R	N	V	G	E	A	I	A	D	F	N	M	I	E	E	G	D	R	I	M	V	C	L	S	G	G	K	D	S	Y	T	M	L	E	I	L	R	N	L	Q	Q	S	A	P	I	N	F	S	L	V	A	V	N	L	D	Q	K	Q	P	G	F	.	.	.	P	E	H	V	L	P	E	Y	L	E
Query Conservation																																																																					.	.	.
Alig confidence																																																				.																	.	.	.
Template Conservation																																																				.
Template Sequence		P	E	S	R	V	I	R	K	V	L	A	L	Q	N	D	E	K	I	F	S	G	E	R	R	V	L	I	A	F	S	G	G	V	D	S	V	V	L	T	D	V	L	L	K	L	K	N	Y	F	S	.	L	K	E	V	A	L	A	H	F	N	H	M	L	R	E	S	A	E	R	D	E	E	F	C	K	E	F	A	K
Template Known Secondary structure																			S		S	S										S	S														T	T	T	T	T	.		S										S		S	S	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	G	V	E	Y	K	I	V	E	E	N	T	Y	G	I	V	K	E	K	I	P	E	G	K	T	T	C	S	L	C	S	R	L	R	R	G	I	L	Y	R	T	A	T	E	L	G	A	T	K	I	A	L	G	H	H	R	D	D	I	L	Q	T	L	F	L	N	M	F	Y	G	G	K	M	K	G	M	P	P	K
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		E	R	N	M	K	I	F	V	G	K	E	D	V	R	A	F	A	K	E	.	.	.	N	R	M	S	L	E	E	A	G	R	F	L	R	Y	K	F	L	K	E	I	L	E	S	E	G	F	D	C	I	A	T	A	H	H	L	N	D	L	L	E	T	S	L	L	F	F	T	R	G	T	G	L	D	G	L	I	G	F
Template Known Secondary structure			T	T														T	T	T	.	.	.	T	S																							T		S																					T										S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		L	M	S	D	D	G	K	H	I	V	I	R	P	L	A	Y	C	R	E	K	D	I	Q	R	F	A	D	A	K	A	F	P	I	I	P	C	N	L	C	G	S	Q	P	N	L	Q	R	Q	V	I	A	.	D	M	L	R	D	W	D	K	R	Y	P	G	R	I	E	T	M	F	S	A	M	Q	N	V	V	P	S	H
Query Conservation																																																					.
Alig confidence								.	.	.																										.																	.
Template Conservation								.	.	.																										.
Template Sequence		L	P	K	E	E	V	.	.	.	I	R	R	P	L	Y	Y	V	K	R	S	E	I	E	E	Y	A	K	F	K	G	L	R	W	V	.	E	D	E	T	N	Y	E	V	S	I	P	R	N	R	I	R	H	R	V	I	P	E	L	K	R	I	N	E	N	L	E	D	T	F	L	K	M	V	K	V	L	R	A	E	R
Template Known Secondary structure			S			T	T	.	.	.				T	T	T	T													T	T					.				G	G	G		T	T	S									T									T	T
Template Predicted Secondary structure								.	.	.																										.
Template SS confidence
		159	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	D	T	N	L	F	D	F	K	G	I	T	H	G	S	E	V	V	N	G	G	D	L	A	F	D	R	E	E	I	P	L	Q	P	A	C	W	Q
Query Conservation
Alig confidence																.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		E	F	L	E	E	E	A	Q	K	L	Y	K	E	V	.	.	.	.	.	.	K	K	G	N	C	L	D	V	K	K	L	K	E	K	P	L	A	L	Q
Template Known Secondary structure																.	.	.	.	.	.			T	T								T	T	S
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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