Job Description P76055 Confidence 99.67% Date Thu Jan 5 12:17:55 GMT 2012 Rank 35 Aligned Residues 163 % Identity 18% Template c2e18B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of project ph0182 from pyrococcus horikoshii ot3 Resolution 2.10 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	N	K	L	Q	K	R	L	R	R	N	V	G	E	A	I	A	D	F	N	M	I	E	E	G	D	R	I	M	V	C	L	S	G	G	K	D	S	Y	T	M	L	E	I	L	R	N	L	Q	Q	S	A	P	I	N	F	S	L	V	A	V	N	L	D	Q	K	Q	P	G	F	P	E	H	V	L	P	E	Y	L
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.																											.	.	.	.																	.
Template Conservation																		.	.	.	.	.	.	.	.																											.	.	.	.																	.
Template Sequence		D	Y	D	K	V	I	E	R	I	L	E	F	I	R	E	K	.	.	.	.	.	.	.	.	G	N	N	G	V	V	I	G	I	S	G	G	V	D	S	A	T	V	A	Y	L	A	T	K	A	L	.	.	.	.	G	K	E	K	V	L	G	L	I	M	P	Y	F	E	N	K	.	D	V	E	D	A	K	L	V	A
Template Known Secondary structure																		.	.	.	.	.	.	.	.		T	T								S	S															.	.	.	.		G	G	G								S	S		S		.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																											.	.	.	.																	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20									.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		E	K	L	G	V	E	Y	K	I	V	E	E	N	T	Y	G	I	V	K	E	K	I	P	E	G	K	T	.	.	.	.	T	C	S	L	C	S	R	L	R	R	G	I	L	Y	R	T	A	T	E	L	G	A	T	K	I	A	L	G	H	H	R	D	D	I	L	Q	T	L	F	L	N	M	F	Y	G	G	K	M	K
Query Conservation																													.	.	.	.
Alig confidence																													.	.	.	.																													.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	L	G	I	G	Y	K	V	I	N	I	K	P	I	V	D	S	F	V	E	N	L	E	L	N	L	D	R	K	G	L	G	N	I	M	S	R	T	R	M	I	M	L	Y	A	H	A	N	S	L	G	R	I	V	L	G	T	S	.	N	R	S	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T																					S																											T								.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	P	P	K	L	M	S	D	D	G	K	H	I	V	I	R	P	L	A	Y	C	R	E	K	D	I	Q	R	F	A	D	A	K	A	F	P
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	L	T	G	Y	F	T	K	W	G	D	G	A	S	D	Y	A	P	I	I	N	L	Y	K	T	E	V	W	E	I	A	K	R	I	G	V	P
Template Known Secondary structure		.			T		S		T	T	T	T	T		S	S	B		T	T	T	T	S												T	T
Template Predicted Secondary structure		.
Template SS confidence
			136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions