Job Description P76055 Confidence 99.88% Date Thu Jan 5 12:17:55 GMT 2012 Rank 17 Aligned Residues 156 % Identity 19% Template c2derA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna-specific 2-thiouridylase mnma; PDBTitle: cocrystal structure of an rna sulfuration enzyme mnma and2 trna-glu in the initial trna binding state Resolution 3.10 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.										.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.																									.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.																									.	.	.
Query Sequence		D	R	I	M	V	C	L	S	G	G	K	D	S	Y	T	M	L	E	I	L	R	N	L	Q	Q	S	A	P	I	N	F	S	L	V	A	V	N	L	D	Q	K	Q	P	G	.	.	.	.	.	.	.	.	.	F	P	E	H	V	L	P	E	Y	L	E	K	L	G	V	E	Y	K	I	V	E	E	N	T	.	.	.
Query Conservation																																														.	.	.	.	.	.	.	.	.																									.	.	.
Alig confidence																									.	.	.	.	.	.																.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																									.	.	.	.	.	.
Template Sequence		K	K	V	I	V	G	M	S	G	G	V	D	S	S	V	S	A	W	L	L	Q	Q	Q	.	.	.	.	.	.	G	Y	Q	V	E	G	L	F	M	K	N	W	E	E	D	D	G	E	E	Y	C	T	A	A	A	D	L	A	D	A	Q	A	V	C	D	K	L	G	I	E	L	H	T	V	N	F	A	A	E	Y	W
Template Known Secondary structure										S		S	T	T									T	T	.	.	.	.	.	.																S																						T
Template Predicted Secondary structure																									.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
							108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.	.
Predicted Secondary structure		.	.	.	.	.																					.										.																																.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																					.										.																																.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	Y	G	I	V	K	E	K	I	P	E	G	K	T	T	C	S	L	C	S	R	.	L	R	R	G	I	L	Y	R	T	.	A	T	E	L	G	A	T	K	I	A	L	G	H	H	R	D	D	I	L	Q	T	L	F	L	N	M	F	Y	G	G	K	.	.	.	.	.	.	.	.	M	K	G	M	P
Query Conservation		.	.	.	.	.																					.										.																																.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																					.										.																																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	V	F	E	L	F	L	A	E	Y	K	A	G	R	T	P	N	P	D	I	L	C	N	K	E	I	K	F	K	A	F	L	E	F	A	A	E	D	L	G	A	D	Y	I	A	T	G	H	Y	V	R	R	A	D	V	D	G	K	S	R	L	L	R	G	L	D	S	N	K	D	Q	S	Y	F	L	Y	T	L	S
Template Known Secondary structure				T										T	T													T	T	T	T									T	T			S							S							T	T								S	S	T	T	T			G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	L	M	S	D	D	G	K	H	I	V	I	R	P	L	A	Y	C	R	E	K	D	I	Q	R	F	A	D	A	K	A	F	P
Query Conservation
Alig confidence								.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		H	E	Q	I	A	Q	.	.	.	.	.	S	L	F	P	V	G	E	L	E	K	P	Q	V	R	K	I	A	E	D	L	G	L	V
Template Known Secondary structure								.	.	.	.	.					G	G	G	S												T	T
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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