Return to main results Retrieve Phyre Job Id

Job DescriptionP03961
Confidence18.08%DateThu Jan 5 10:58:08 GMT 2012
Rank34Aligned Residues24
% Identity29%Templatec3dm5A_
PDB info PDB header:rna binding protein, transport proteinChain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus.
Resolution2.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160....
Predicted Secondary structure 




Query SS confidence 























Query Sequence  IPRVAKARNLSVEQLTQLIAKYSQ
Query Conservation 
 


 



    
  

   
 
Alig confidence 























Template Conservation    


 


     
  

     
Template Sequence  IKRIARGSGTSTKDVKELLDQYRQ
Template Known Secondary structure  TS
Template Predicted Secondary structure 



Template SS confidence 























   398.400.........410.........420.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions