Return to main results Retrieve Phyre Job Id

Job DescriptionP03961
Confidence14.57%DateThu Jan 5 10:58:08 GMT 2012
Rank46Aligned Residues24
% Identity29%Templatec1qzwC_
PDB info PDB header:signaling protein/rnaChain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication
Resolution4.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160....
Predicted Secondary structure 




Query SS confidence 























Query Sequence  IPRVAKARNLSVEQLTQLIAKYSQ
Query Conservation 
 


 



    
  

   
 
Alig confidence 























Template Conservation    


 


     
  

     
Template Sequence  MRRIAEGSGLEVEEVRELLEWYNN
Template Known Secondary structure  TT

GGGT
Template Predicted Secondary structure 



Template SS confidence 























   400.........410.........420...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions