Return to main results Retrieve Phyre Job Id

Job DescriptionQ46834
Confidence99.41%DateThu Jan 5 12:34:59 GMT 2012
Rank13Aligned Residues72
% Identity11%Templated1lcya1
SCOP infoPDZ domain-like PDZ domain-like HtrA-like serine proteases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   202.......210.........220.........230.........240.........250.........260.........270......
Predicted Secondary structure 




























Query SS confidence 










































































Query Sequence  RKEGIVGYAAKPGADRSLFDASGFKEGDIAIALNQQDFTDPRAMIALMRQLPSMDSIQLTVLRKGARHDISIALR
Query Conservation     
  
  
  
   
 
  


  



  


  
               
  
 
 
 
 
    
 
 
 
Alig confidence 















































...























Template Conservation        

 
  
   


  


  



  


  
     
   
...     
 
 
 
 
      
 
 
Template Sequence  FPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAV. . . RTQSQLAVQIRRGRETLTLYVTPE
Template Known Secondary structure  S


SS

TTST

TT
TT

S...TT
SSTT

Template Predicted Secondary structure 






















...





Template SS confidence 










































































   251........260.........270.........280.........290........ .300.........310.........320..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions