Return to main results Retrieve Phyre Job Id

Job DescriptionQ46834
Confidence98.26%DateThu Jan 5 12:34:59 GMT 2012
Rank189Aligned Residues57
% Identity12%Templated1i16a_
SCOP infoPDZ domain-like PDZ domain-like Interleukin 16
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   207..210.........220.... .....230.........240.. .......250.........260....
Predicted Secondary structure 







.









..




Query SS confidence 

















.

















. .





















Query Sequence  VGYAAKPGADRSLFDASG. FKEGDIAIALNQQDFTDP. . RAMIALMRQLPSMDSIQLTVLR
Query Conservation   
  
  
   
 
  

.
  



  


  
   ..            
  
 
 
 
Alig confidence 

















.

















..












.







Template Conservation    
 
  
  

 
   
 
  

 

 


  
   
  


  

     . 
 
 
 
Template Sequence  KPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDG. PVTIVIRR
Template Known Secondary structure 



SS


SSS



TT


SS
BGGGS
TS
SS.
Template Predicted Secondary structure 























.
Template SS confidence 




























































   57..60.........70.........80.........90.........100........ .110......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions