Job Description Q46834 Confidence 99.10% Date Thu Jan 5 12:34:59 GMT 2012 Rank 27 Aligned Residues 224 % Identity 15% Template c4a8aI_ PDB info PDB header:hydrolase/hydrolase Chain: I: PDB Molecule:periplasmic ph-dependent serine endoprotease degq; PDBTitle: asymmetric cryo-em reconstruction of e. coli degq 12-mer in complex2 with lysozyme Resolution 14.20 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	Q	N	W	F	G	K	Y	Q	P	V	A	A	Q	V	K	Q	P	E	P	V	P	V	A	E	T	R	L	N	V	V	L	R	G	I	A	F	G	A	R	P	G	A	V	I	E	E	G	G	K	Q	Q	V	Y	L	Q	G	E	T	L	G	S	H	N	A	V	I	E	E	I	N	R	D	H	V	M	L	R	Y
Query Conservation
Alig confidence																																															.	.	.	.	.
Template Conservation																																															.	.	.	.	.
Template Sequence		S	D	I	A	L	L	Q	I	Q	N	P	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	.	.	.	.	.	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	N	R	G
Template Known Secondary structure		T	T							S	S			S									G	G	G			S										S	T	T		S	S				.	.	.	.	.												S		S	S	S	S								S				T	T
Template Predicted Secondary structure																																															.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	K	I	E	R	L	S	L	A	E	E	E	R	S	T	V	A	V	T	N	K	K	A	V	S	D	E	A	K	Q	A	V	A	E	P	A	V	S	V	P	V	E	I	P	A	A	V	R	Q	A	L	A	K	D	P	Q	K	I	F	N	Y	I	Q	L	T	P	V	R	K	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		N	A	G	G	A	L	L	N	L	N	G	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	.	.	.	.	.	.	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D	F	G	E	I	K	R	G	L	L	G	I	K	G	T	E	M	S	A	D	I	A	K	A	F	N	L
Template Known Secondary structure			T	T						T	T	S												T	T	S	S			S		.	.	.	.	.	.						T	T											S	S				T	T	S	S						B										S
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	I	V	G	Y	A	A	K	P	G	A	D	R	S	L	F	D	A	S	G	F	K	E	G	D	I	A	I	A	L	N	Q	Q	D	F	T	D	P	R	A	M	I	A	L	M	R	Q	L	P	S	M	D	S	I	Q	L	T	V	L	R	K	G	A	R	H	D	I	S	I	A	L	R	Y	R	L	F	C	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	Q	R	G	A	F	V	S	E	V	L	P	G	S	G	S	A	K	A	G	V	K	A	G	D	I	I	T	S	L	N	G	K	P	L	N	S	F	A	E	L	R	S	R	I	A	T	T	E	P	G	T	K	V	K	L	G	L	L	R	N	G	K	P	L	E	V	E	V	S	A	E	M	I	T	P	A	L	E
Template Known Secondary structure		T	T	S	S		B	B						T	T	S	G	G	G	S	S				T	T						S	S	S	S	B			T									T	T	S		S	S									T	T	S	S											S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		284	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	W	K	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	T	L	S
Template Known Secondary structure			S			B
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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