Return to main results Retrieve Phyre Job Id

Job DescriptionQ46834
Confidence99.53%DateThu Jan 5 12:34:59 GMT 2012
Rank6Aligned Residues144
% Identity16%Templatec3pv5B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:degq; PDBTitle: structure of legionella fallonii degq (n189g/p190g variant)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160.........170.........180.........190.........200.
Predicted Secondary structure 













































..
Query SS confidence 













































































. .
Query Sequence  INRDHVMLRYQGKIERLSLAEEERSTVAVTNKKAVSDEAKQAVAEPAVSVPVEIPAAVRQALAKDPQKIFNYIQLTPV. .
Query Conservation 
  
 

    
    
 
                                                 
         ..
Alig confidence 

































..........

































..
Template Conservation           
 




    
 



        ..........     

          
          


     
Template Sequence  IQTDAAIGGGNSGGALVNAKGELIGINTAILGNV. . . . . . . . . . GIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHL
Template Known Secondary structure  S


TT
BSS
TT






T..........T
SS

B
B


Template Predicted Secondary structure 















..........











Template SS confidence 















































































   182.......190.........200.........210..... ....220.........230.........240.........250.
 
   202.......210.........220.........230.........240.........250.........260.........270..
Predicted Secondary structure  .........




























Query SS confidence  . . . . . . . . .






































































Query Sequence  . . . . . . . . . RKEGIVGYAAKPGADRSLFDASGFKEGDIAIALNQQDFTDPRAMIALMRQLPSMDSIQLTVLRKGARHDIS
Query Conservation  .........   
  
  
  
   
 
  


  



  


  
               
  
 
 
 
 
    
 
Alig confidence  .........






































































Template Conservation          
      
  
  
   
 
  


  

 
  


  
               
  
 
 
 
        
Template Sequence  TPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLS
Template Known Secondary structure 
TTS
TT



TTSTT

TT
TT

S
BTT
TT
Template Predicted Secondary structure 





























Template SS confidence 















































































   256...260.........270.........280.........290.........300.........310.........320.........330.....
 
   273....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  IALRY
Query Conservation 
 
  
Alig confidence 




Template Conservation 
    
Template Sequence  AVVTD
Template Known Secondary structure 
B
Template Predicted Secondary structure 

Template SS confidence 




   336...340
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions