 |
Job Description | Q46834 | Confidence | 98.48% | Date | Thu Jan 5 12:34:59 GMT 2012 |
Rank | 115 | Aligned Residues | 67 |
% Identity | 10% | Template | c3hpmA_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:protein interacting with prkca 1; |
PDBTitle: oxidized dimeric pick1 pdz c46g mutant in complex with the carboxyl2 tail peptide of glur2
|
Resolution | 2.80 Å |
|
 |
  |   |
196 | . | . | . | 200 | . | . | . | . | . | |
. | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | |
. | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | |
|
. | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | Q | L | T | P | V | R | K | E | G | . |
I | V | G | Y | A | A | K | P | G | A | D | R | S | L | F | D | A | S | G | . |
F | K | E | G | D | I | A | I | A | L | N | Q | Q | D | F | T | D | P | . |
. |
R | A | M | I | A | L | M | R | Q | L | P | S | M | D | S | I | Q | L | T | V | L | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
| . |   |   |
|   |   |
|   |   |
|   |   |   |
|   |
|   |   |
|
| . |
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   | . | . |   |   |   |   |
|   |
|   |
|   |
|
Template Sequence |   |
I | G | I | S | I | G | G | G | A | Q | Y | C | P | G | L | Y | I | V | Q | V | F | D | N | T | P | A | A | L | D | G | T | V | A | A | G | D | E | I | T | G | V | N | G | R | S | I | K | G | K | T | K | V | E | V | A | K | M | I | Q | E | . |
. |
V | K | G | E | V | T | I | H | Y | N | K |
Template Known Secondary structure |   |
| S |  |  |  |  |  |
| S | S |
|
| S |
|  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |
|
|
|
| T | T |
|  |  |  |  |  | T | T |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | . | . |
|
| S |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
. | . | . | . | . | . | . | 100 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|