Job Description Q46834 Confidence 99.33% Date Thu Jan 5 12:34:59 GMT 2012 Rank 16 Aligned Residues 72 % Identity 18% Template c2joaA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:serine protease htra1; PDBTitle: htra1 bound to an optimized peptide: nmr assignment of pdz2 domain and ligand resonances Resolution UNK

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	E	G	I	V	G	Y	A	A	K	P	G	A	D	R	S	L	F	D	A	S	G	F	K	E	G	D	I	A	I	A	L	N	Q	Q	D	F	T	D	P	R	A	M	I	A	L	M	R	Q	L	P	S	M	D	S	I	Q	L	T	V	L	R	K	G	A	R	H	D	I	S	I	A	L	R
Query Conservation
Alig confidence																																																				.	.	.
Template Conservation																																																				.	.	.
Template Sequence		F	P	D	V	I	S	G	A	Y	I	I	E	V	I	P	D	T	P	A	E	A	G	G	L	K	E	N	D	V	I	I	S	I	N	G	Q	S	V	V	S	A	N	D	V	S	D	V	I	K	R	.	.	.	E	S	T	L	N	M	V	V	R	R	G	N	E	D	I	M	I	T	V	I	P	E
Template Known Secondary structure		S		S				S								S	S	S						T			T	T					B		S	S		B			S											.	.	.		S	S								T	T										B
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.				.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions