Job Description Q46834 Confidence 98.55% Date Thu Jan 5 12:34:59 GMT 2012 Rank 83 Aligned Residues 69 % Identity 16% Template c2i04B_ PDB info PDB header:peptide binding protein Chain: B: PDB Molecule:membrane-associated guanylate kinase, ww and pdz PDBTitle: x-ray crystal structure of magi-1 pdz1 bound to the c-2 terminal peptide of hpv18 e6 Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		196	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure												.																				.																	.	.
Query SS confidence												.																				.																	.	.
Query Sequence		I	Q	L	T	P	V	R	K	E	G	.	I	V	G	Y	A	A	K	P	G	A	D	R	S	L	F	D	A	S	G	.	F	K	E	G	D	I	A	I	A	L	N	Q	Q	D	F	T	.	.	D	P	R	A	M	I	A	L	M	R	Q	L	P	S	M	D	S	I	Q	L	T	V	L	R
Query Conservation												.																				.																	.	.
Alig confidence												.																				.																	.	.
Template Conservation
Template Sequence		F	G	F	T	V	V	G	G	D	E	P	D	E	F	L	Q	I	K	S	L	V	L	D	G	P	A	A	L	D	G	K	M	E	T	G	D	V	I	V	S	V	N	D	T	C	V	L	G	H	T	H	A	Q	V	V	K	I	F	Q	S	I	P	I	G	A	S	V	D	L	E	L	C	R
Template Known Secondary structure		S	S							S	S	T	T	S									T	T	S										T	T							T	T				T	T												T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions