Job Description Q46834 Confidence 98.59% Date Thu Jan 5 12:34:59 GMT 2012 Rank 68 Aligned Residues 68 % Identity 9% Template c2gzvA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:prkca-binding protein; PDBTitle: the cystal structure of the pdz domain of human pick1 (casp target) Resolution 1.12 Å

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																															.																	.	.
Query SS confidence																															.																	.	.
Query Sequence		I	Q	L	T	P	V	R	K	E	G	I	V	G	Y	A	A	K	P	G	A	D	R	S	L	F	D	A	S	G	.	F	K	E	G	D	I	A	I	A	L	N	Q	Q	D	F	T	.	.	D	P	R	A	M	I	A	L	M	R	Q	L	P	S	M	D	S	I	Q	L	T	V	L	R	K	G
Query Conservation																															.																	.	.
Alig confidence												.																			.																	.	.												.	.
Template Conservation												.																																																	.	.
Template Sequence		I	G	I	S	I	G	G	G	A	Q	.	P	C	L	Y	I	V	Q	V	F	D	N	T	P	A	A	L	D	G	T	V	A	A	G	D	E	I	T	G	V	N	G	R	S	I	K	G	K	T	K	V	E	V	A	K	M	I	Q	E	.	.	V	K	G	E	V	T	I	H	Y	N	K	L	Q
Template Known Secondary structure			S									.										T	T	S										T	T							T	T				T	T													.	.			S
Template Predicted Secondary structure												.																																																	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions