Job Description Q46834 Confidence 98.91% Date Thu Jan 5 12:34:59 GMT 2012 Rank 29 Aligned Residues 71 % Identity 21% Template c2eaqA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:lim domain only protein 7; PDBTitle: crystal structure of pdz domain of kiaa0858 (lim), ms07932 from homo sapiens Resolution 1.46 Å

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		I	Q	L	T	P	V	R	K	E	G	I	V	G	Y	A	A	K	P	G	A	D	R	S	L	F	D	A	S	G	F	K	E	G	D	I	A	I	A	L	N	Q	Q	D	F	T	.	.	D	P	R	A	M	I	A	L	M	R	Q	L	P	S	M	D	S	I	Q	L	T	V	L	R	K	G
Query Conservation																																															.	.
Alig confidence																																															.	.
Template Conservation
Template Sequence		L	D	F	G	F	T	I	K	W	D	I	P	G	I	F	V	A	S	V	E	A	G	S	P	A	E	F	S	Q	L	Q	V	D	D	E	I	I	A	I	N	N	T	K	F	S	Y	N	D	S	K	E	W	E	E	A	M	A	K	A	Q	E	T	G	H	L	V	M	D	V	R	R	Y	G
Template Known Secondary structure		S			S							T	T									T	T	S					T	T			T	T							T	T					T	T																T
Template Predicted Secondary structure
Template SS confidence
		1053	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions