Job Description Q46834 Confidence 98.60% Date Thu Jan 5 12:34:59 GMT 2012 Rank 66 Aligned Residues 68 % Identity 22% Template c2d90A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:pdz domain containing protein 1; PDBTitle: solution structure of the third pdz domain of pdz domain2 containing protein 1 Resolution UNK

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		I	Q	L	T	P	V	R	K	E	G	I	V	G	Y	A	A	K	P	G	A	D	R	S	L	F	D	A	S	G	F	K	E	G	D	I	A	I	A	L	N	Q	Q	D	F	T	D	P	.	.	R	A	M	I	A	L	M	R	Q	L	P	S	M	D	S	I	Q	L	T	V	L	R	K
Query Conservation																																																	.	.
Alig confidence																																																	.	.										.	.
Template Conservation																																																												.	.
Template Sequence		Y	G	F	Y	L	R	A	G	P	E	Q	K	G	Q	I	I	K	D	I	E	P	G	S	P	A	E	A	A	G	L	K	N	N	D	L	V	V	A	V	N	G	K	S	V	E	A	L	D	H	D	G	V	V	E	M	I	R	K	.	.	G	G	D	Q	T	T	L	L	V	L	D	K
Template Known Secondary structure		S	S							S	S	S	S	S								T	T	S	T	T	T	T	T	T			T	T							S	S		B		T	T	S												.	.	S	T	T								S	T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions