Job Description Q46834 Confidence 98.18% Date Thu Jan 5 12:34:59 GMT 2012 Rank 200 Aligned Residues 82 % Identity 11% Template c1u3bA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains Resolution UNK

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		196	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure												.																				.																	.	.
Query SS confidence												.																				.																	.	.
Query Sequence		I	Q	L	T	P	V	R	K	E	G	.	I	V	G	Y	A	A	K	P	G	A	D	R	S	L	F	D	A	S	G	.	F	K	E	G	D	I	A	I	A	L	N	Q	Q	D	F	T	.	.	D	P	R	A	M	I	A	L	M	R	Q	L	P	S	M	D	S	I	Q	L	T	V	L	R	K	G	A	R	H	D	I
Query Conservation												.																				.																	.	.
Alig confidence												.																				.																	.	.
Template Conservation
Template Sequence		V	V	I	V	E	S	G	W	G	S	I	L	P	T	V	I	I	A	N	M	M	H	G	G	P	A	E	K	S	G	K	L	N	I	G	D	Q	I	M	S	I	N	G	T	S	L	V	G	L	P	L	S	T	C	Q	S	I	I	K	G	L	K	N	Q	S	R	V	K	L	N	I	V	R	C	P	P	V	T	T	V
Template Known Secondary structure									S	S		S	S		S								S	S	S						S	S			T	T							T	T				T	T	S												T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		272	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	A	L	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	R	R	P	D
Template Known Secondary structure						S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions