Job Description Q46834 Confidence 98.27% Date Thu Jan 5 12:34:59 GMT 2012 Rank 185 Aligned Residues 108 % Identity 9% Template c1fc9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:photosystem ii d1 protease; PDBTitle: photosystem ii d1 c-terminal processing protease Resolution 1.90 Å

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		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.
Predicted Secondary structure																																										.																																				.	.
Query SS confidence																																										.																																				.	.
Query Sequence		V	A	E	P	A	V	S	V	P	V	E	I	P	A	A	V	R	Q	A	L	A	K	D	P	Q	K	I	F	N	Y	I	Q	L	T	P	V	R	K	E	G	.	I	V	G	Y	A	A	K	P	G	A	D	R	S	L	F	D	A	S	G	F	K	E	G	D	I	A	I	A	L	N	Q	Q	D	F	T	.	.	D	P
Query Conservation																																										.																																				.	.
Alig confidence																																										.																																				.	.
Template Conservation
Template Sequence		L	A	V	L	D	D	P	F	T	R	F	L	E	P	S	R	L	A	A	L	R	R	G	T	A	G	S	V	T	G	V	G	L	E	I	T	Y	D	G	G	S	G	K	D	V	V	V	L	T	P	A	P	G	G	P	A	E	K	A	G	A	R	A	G	D	V	I	V	T	V	D	G	T	A	V	K	G	L	S	L
Template Known Secondary structure				T	T			T	T																S		S	S		B			S							S	S		S	S									T	T							T			T	T							T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		R	A	M	I	A	L	M	R	Q	L	P	S	M	D	S	I	Q	L	T	V	L	R	.	.	.	K	G	A	R	H	D	I	S	I	A
Query Conservation																								.	.	.
Alig confidence											.													.	.	.
Template Conservation											.
Template Sequence		Y	D	V	S	D	L	L	Q	G	.	E	A	D	S	Q	V	E	V	V	L	H	A	P	G	A	P	S	N	T	R	T	L	Q	L	T
Template Known Secondary structure										B	.	S	T	T										T	T		S	S	S
Template Predicted Secondary structure											.
Template SS confidence
		213	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions