 |
Job Description | P00816 | Confidence | 31.59% | Date | Thu Jan 5 10:56:55 GMT 2012 |
Rank | 116 | Aligned Residues | 50 |
% Identity | 12% | Template | d1d5ya1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| AraC type transcriptional activator
|
Resolution | 2.70 |
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | N | I | R | L | D | L | A | D | A | I | L | L | S | K | A | K | K | D | L | S | F | A | E | I | A | D | G | T | G | L | A | E | A | F | V | T | A | A | L | L | G | Q | Q | A | L | P | A | D | A |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|   |
|
|   |   |   |
|
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |
|   |
|
|   |   |
Template Sequence |   |
Q | A | G | I | I | R | D | L | L | I | W | L | E | G | H | L | D | Q | P | L | S | L | D | N | V | A | A | K | A | G | Y | S | K | W | H | L | Q | R | M | F | K | D | V | T | G | H | A | I | G | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | S |
|
|
|  |  |  |  | T | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|