Return to main results Retrieve Phyre Job Id

Job DescriptionP00816
Confidence48.03%DateThu Jan 5 10:56:55 GMT 2012
Rank85Aligned Residues22
% Identity9%Templatec3t72o_
PDB info PDB header:transcription/dnaChain: O: PDB Molecule:pho box dna (strand 1); PDBTitle: phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-dna transcription2 activation sub-complex
Resolution4.33 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40......
Predicted Secondary structure 






Query SS confidence 





















Query Sequence  KDLSFAEIADGTGLAEAFVTAA
Query Conservation 




  

  

 



 

 
Alig confidence 





















Template Conservation     

 


  










Template Sequence  TDYTLEEVGKQFDVTRERIRQI
Template Known Secondary structure  S


SS
Template Predicted Secondary structure 






Template SS confidence 





















   569570.........580.........590
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions