Job Description P00816 Confidence 96.31% Date Thu Jan 5 10:56:55 GMT 2012 Rank 34 Aligned Residues 94 % Identity 13% Template c3pxpA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:helix-turn-helix domain protein; PDBTitle: crystal structure of a pas and dna binding domain containing protein2 (caur_2278) from chloroflexus aurantiacus j-10-fl at 2.30 a3 resolution Resolution 2.30 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																										.																									.	.	.	.
Query SS confidence																		.	.	.	.	.	.																										.																									.	.	.	.
Query Sequence		N	I	R	L	D	L	A	D	A	I	L	L	S	K	A	K	.	.	.	.	.	.	K	D	L	S	F	A	E	I	A	D	G	T	G	L	A	E	A	F	V	T	A	A	L	L	G	.	Q	Q	A	L	P	A	D	A	A	R	L	V	G	A	K	L	D	L	D	E	D	S	I	L	.	.	.	.	L	L	Q	M
Query Conservation																		.	.	.	.	.	.																										.																									.	.	.	.
Alig confidence																		.	.	.	.	.	.																										.																									.	.	.	.
Template Conservation
Template Sequence		X	E	R	A	A	F	G	K	L	V	Q	A	L	R	R	E	H	R	D	E	K	G	R	V	W	T	Q	E	V	L	A	E	R	T	Q	L	P	K	R	T	I	E	R	I	E	N	G	S	L	A	H	L	D	A	D	I	L	L	R	L	A	D	A	L	E	L	T	I	G	E	R	R	E	F	F	F	A	A	T	G
Template Known Secondary structure																	T		B		T	T	S		B											T												T			S														T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	R	G	C	I	D	D	R	I	P	T	D	P	T	M	Y	R	F	Y	E	M	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	E	Q	K	S	A	T	Y	K	R	S	P	E	E	S	L	Q	Y	L	I	D	X	I	R
Template Known Secondary structure					S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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