 |
Job Description | P00816 | Confidence | 29.52% | Date | Thu Jan 5 10:56:55 GMT 2012 |
Rank | 118 | Aligned Residues | 32 |
% Identity | 13% | Template | c3osgA_ |
PDB info |
PDB header:transcription/dna | Chain: A: PDB Molecule:myb21; |
PDBTitle: the structure of protozoan parasite trichomonas vaginalis myb2 in2 complex with mre-1-12 dna
|
Resolution | 2.00 Å |
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
. | . | . | 40 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
L | D | L | A | D | A | I | L | L | S | K | A | K | K | D | L | S | F | A | E | I | A | D | G | T | . |
G | L | A | E | A | F | V |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|   |   |
|
|   |   |
| . |
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|
Template Sequence |   |
A | E | E | D | A | L | L | V | Q | K | I | Q | E | Y | G | R | Q | W | A | I | I | A | K | F | F | P | G | R | T | D | I | H | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
|  |  |  |  |  | T | T | S | T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|