Return to main results Retrieve Phyre Job Id

Job DescriptionP00816
Confidence96.72%DateThu Jan 5 10:56:55 GMT 2012
Rank17Aligned Residues59
% Identity15%Templatec3op9A_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:pli0006 protein; PDBTitle: crystal structure of transcriptional regulator from listeria innocua
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70..
Predicted Secondary structure 
















Query SS confidence 


























































Query Sequence  LADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSI
Query Conservation   
  

 

  




  

  

 



 

   


      
 

  

 
  
  
Alig confidence 


























































Template Conservation   
  

 

   



  

   


 



  
 
   
    
  
   
 

   
Template Sequence  FAENLSRLKKEHGLKNHQIAELLNVQTRTVAYYXSGETKPDIEKLIRLATYFHLSIDEL
Template Known Secondary structure  T

TS
TSS


T

Template Predicted Secondary structure 
















Template SS confidence 


























































   7..10.........20.........30.........40.........50.........60.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions