 |
Job Description | P00816 | Confidence | 21.14% | Date | Thu Jan 5 10:56:55 GMT 2012 |
Rank | 155 | Aligned Residues | 26 |
% Identity | 19% | Template | c1f93F_ |
PDB info |
PDB header:transcription | Chain: F: PDB Molecule:hepatocyte nuclear factor 1-alpha; |
PDBTitle: crystal structure of a complex between the dimerization2 domain of hnf-1 alpha and the coactivator dcoh
|
Resolution | 2.60 Å |
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | L | A | D | A | I | L | L | S | K | A | K | K | D | L | S | F | A | E | I | A | D | G | T | G |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
S | Q | L | Q | T | E | L | L | A | A | L | L | E | S | G | L | S | K | E | A | L | I | Q | A | L | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|