Return to main results Retrieve Phyre Job Id

Job DescriptionP08394
Confidence99.95%DateThu Jan 5 11:01:26 GMT 2012
Rank16Aligned Residues302
% Identity14%Templated1w36c2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   509510.........520.........530.........540.........550.........560 .........570..... ....580...
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Query Sequence  CGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRS. RQEAAQVRDALTLLE. . . . IPSVYLSN
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Template Sequence  FHVCHSPQREVEVLHDRLLAMLEED. . . . . . . . . . . . . PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY. AISD
Template Known Secondary structure  SSS.............TT

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   376...380.........390.........400 .........410.........420.........430....... ..440.
 
   584.....590.........600.........610.........620 .........630...
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Query Sequence  RDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSM. . . . MGLNALDIETLNN. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ
Template Known Secondary structure  TGGG
TTGGG



TTSTT

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   442.......450.........460.........470.........480.........490.........500.........510.........520.
 
   634.....640.........650.........660.........670.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DEHAWDVVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLL
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Template Sequence  HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM. LNAFFL
Template Known Secondary structure  SSSS
STT

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TTS
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   522.......530.........540.........550.........560.........570.........580.........590.... .....600
 
   676...680.........690.........700.. .......710.........720.........730.........740.........750
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Query Sequence  ATAGGERRLTDILHISELLQEAGTQLE. . . . . SEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVTIHKSKGLEYP
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Template Sequence  PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL. . . . . . . DQERISQRFLAGPVNICTLMPMRSIPFK
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   601........610.........620.........630.........640..... ....650.........660.........670...
 
   751........760.........770.........780.........790.........800.........810.........820.........830
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Query Sequence  LVWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGD
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Template Sequence  VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS. . . . . . . . . RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP
Template Known Secondary structure 

BTTTSS





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   674.....680.........690.........700....... ..710.........720.........730.........740....
 
   831........840.
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Query Sequence  TDVHQSALGRL
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Template Sequence  SVLVQELIDYI
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   745....750.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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