Job Description P08394 Confidence 97.79% Date Thu Jan 5 11:01:26 GMT 2012 Rank 30 Aligned Residues 198 % Identity 16% Template c3l0aA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative exonuclease; PDBTitle: crystal structure of putative exonuclease (rer070207002219) from2 eubacterium rectale at 2.19 a resolution Resolution 2.19 Å

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		898	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.						.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		G	D	N	W	R	V	T	S	Y	S	G	L	Q	Q	R	G	H	.	.	.	.	.	G	I	A	Q	D	L	M	P	R	L	D	V	D	A	A	G	V	A	S	V	V	E	E	P	T	L	T	P	H	Q	F	P	R	G	A	S	P	G	T	F	L	H	S	L	F	E	D	L	D	F	T	Q	P	V	D	P	N	W
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Sequence		E	A	N	K	E	Y	X	S	V	S	G	Y	K	D	F	A	G	T	Y	G	K	X	P	C	E	F	Y	G	X	E	K	L	N	G	R	W	E	D	E	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	L	L	V	G	S	Y	V	D	S	Y	F	E	G	.	.	.	S	L	D	Q	F	K	K	D
Template Known Secondary structure																			B	T	T	B													T	S							.	.	.	.	.	.	.	.	.	.	.	.	.															T	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.														.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.
		973	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	E	K	L	E	L	G	G	F	E	S	Q	W	E	P	V	L	T	E	W	I	T	A	V	L	Q	A	P	L	N	E	T	G	V	S	L	S	Q	L	S	A	R	N	K	Q	V	E	M	E	F	Y	L	P	I	S	E	P	L	I	A	S	Q	L	D	T	L	I	R	Q	F	D	P	L	S	A	G	C	P	P
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	E	I	F	T	Q	K	G	E	L	K	A	N	F	K	Q	A	E	E	I	I	A	R	I	E	R	D	E	Y	F	X	.	.	.	.	.	.	.	.	K	Y	X	S	G	Q	K	Q	V	I	X	T	G	E	L	F	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G	B		T	T	S	S	B																T						.	.	.	.	.	.	.	.			T	T	S											T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		1053	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.							.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.
Query Sequence		L	E	F	M	Q	V	R	G	M	L	K	G	F	I	D	L	V	F	R	H	E	G	R	Y	Y	L	L	D	Y	K	S	N	W	L	G	E	D	S	S	A	Y	T	Q	Q	A	M	A	A	A	.	.	.	.	.	.	M	Q	A	H	R	Y	D	L	Q	Y	Q	L	Y	T	L	A	L	H	R	Y	L	R	H	R	I
Query Conservation																																																			.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.										.					.	.								.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.										.					.	.								.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	K	W	K	I	K	X	D	S	Y	.	I	P	G	V	.	.	A	I	V	D	L	K	V	.	.	.	.	.	.	X	A	S	I	T	D	L	K	W	V	K	D	I	G	Y	L	D	F	V	R	Y	W	G	Y	D	I	Q	G	A	V	Y	Q	E	I	V	R	Q	N	T	G	E	K	L
Template Known Secondary structure		.	.	.	.	.	.	.	.										.		T	T	T	.	.								.	.	.	.	.	.		S		S	S						T	T	T									T	T																	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.										.					.	.								.	.	.	.	.	.
Template SS confidence
										126	.	.	.	130	.	.	.	.		.	.	.	.			.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		1127	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	Y	D	Y	E	H	H	F	G	G	V	I	Y	L	F	L	R	G	V	D	K	E	H	P	Q	Q	G	I	Y	T	T	R	P	N	A	G	L	I	A	L	M	D	E	M
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	A	G	A	T	K	Q	T	E	P	D	I	R	I	I	H	V	T	D	N	Y	L	Q	E	A	L	H	X	V
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.								S	S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190														.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions