Job Description P08394 Confidence 98.02% Date Thu Jan 5 11:01:26 GMT 2012 Rank 29 Aligned Residues 146 % Identity 18% Template c3h4rA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease 8; PDBTitle: crystal structure of e. coli rece exonuclease Resolution 2.80 Å

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		905	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	S	G	L	Q	Q	R	G	H	G	I	A	Q	D	L	M	P	R	L	D	V	D	A	A	G	V	A	S	V	V	E	E	P	T	L	T	P	H	Q	F	P	R	G	A	S	P	G	T	F	L	H	S	L	F	E	D	L	D	F	T	Q	P	V	D	P	N	W	V	R	E	K	L	E	L	G	G	F	E	S
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	S	Q	L	D	D	I	A	D	T	P	A	L	Y	L	W	R	K	N	A	P	V	D	T	T	K	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	L	G	T	A	F	H	C	R	V	L	E	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	F	S	N	R	A	E	E	G
Template Known Secondary structure																				T	T	S								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T										S	S	.	.	.	.	.	.	.	.	.	.	.	.					T						T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.															.	.	.	.	.	.	650	.	.	.	.	.	.	.													.	.	660	.	.	.	.	.	.	.	.
		985	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	E	P	V	L	T	E	W	I	T	A	V	L	Q	A	P	L	N	E	T	G	V	S	L	S	Q	L	S	A	R	N	K	Q	V	E	M	E	F	Y	L	P	I	S	E	P	L	I	A	S	Q	L	D	T	L	I	R	Q	F	D	P	L	S	A	G	C	P	P	L	E	F	M	Q	V	R	G	M	L	K	G
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	I	E	L	M	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	M	A	L	P	L	G	Q	W	L	V	E	S	A	G	H	A	E	S	S	I	Y	W	E	D	P	E	T	G	I	L	C	R	C
Template Known Secondary structure		T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S								S	S	S		B	S	S								T	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		703	.	.	.	.	.	.	710																																						.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.
		1065	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	D	L	V	F	R	H	E	G	R	Y	Y	L	L	D	Y	K	S	N	W	L	G	E	D	S	S	A	Y	T	Q	Q	A	M	A	A	A	M	Q	A	H	R	Y	D	L	Q	Y	Q	L	Y	T	L	A	L	H	R	Y	L	R
Query Conservation
Alig confidence							.	.															.	.	.	.	.	.	.	.
Template Conservation							.	.															.	.	.	.	.	.	.	.
Template Sequence		R	P	D	K	I	.	.	I	P	E	F	H	W	I	M	D	V	K	T	T	A	.	.	.	.	.	.	.	.	D	I	Q	R	F	K	T	A	Y	Y	D	Y	R	Y	H	V	Q	D	A	F	Y	S	D	G	Y	E	A	Q	F	G
Template Known Secondary structure				S			.	.		G	G	G	T									S	.	.	.	.	.	.	.	.													T	T	T															S
Template Predicted Secondary structure							.	.															.	.	.	.	.	.	.	.
Template SS confidence
		746	.	.	.	750			.	.	.	.	.	.	.	.	.	760	.	.	.	.									.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions