Job Description P08394 Confidence 73.51% Date Thu Jan 5 11:01:26 GMT 2012 Rank 349 Aligned Residues 39 % Identity 26% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	D	V	A	E	T	L	D	P	L	R	L	P	L	Q	G	E	R	L	I	E	A	S	A	G	T	G	K	T	F	T	I	A	A	L	Y	L	R	L
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		L	G	E	E	A	K	K	L	E	L	N	P	K	K	Q	N	V	I	L	L	V	.	G	I	Q	G	S	G	K	T	T	T	A	A	K	L	A	R	Y	I
Template Known Secondary structure					S								S	S	S								.			S	S	S	S	T	T
Template Predicted Secondary structure																							.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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