Job Description P08394 Confidence 91.20% Date Thu Jan 5 11:01:26 GMT 2012 Rank 88 Aligned Residues 50 % Identity 26% Template c1hv8B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:putative atp-dependent rna helicase mj0669; PDBTitle: crystal structure of a dead box protein from the2 hyperthermophile methanococcus jannaschii Resolution 3.00 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	I	E	A	S	A	G	T	G	K	T	F	T	I	A	A	L	Y	L	R	L	L	L	G	L	G	G	S	A	A	F	P	R	P	L	T	V	E	E	L	L	V	V	T	F	T	E	A	A	T	A	E	L	R	G	R	I	R	S
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	A	Q	A	R	T	G	S	G	K	T	A	S	F	A	I	P	L	I	E	L	V	N	E	N	N	G	I	.	.	.	.	.	.	.	.	.	.	E	A	I	I	L	T	P	T	R	E	L	A	I	Q	V	A	D	E	I	E	S
Template Known Secondary structure								S	S	S	S													S		S	S	S	S		.	.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.											.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions