Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF64
Confidence35.54%DateThu Jan 5 11:31:22 GMT 2012
Rank480Aligned Residues36
% Identity11%Templated2oa4a1
SCOP infoDNA/RNA-binding 3-helical bundle TrpR-like SPO1678-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........
Predicted Secondary structure 







Query SS confidence 



































Query Sequence  GKKVDSARALIARGWGVSLVSRCLRVSRAQLHVILR
Query Conservation           
   
 
   

   



 
 
    
Alig confidence 



































Template Conservation 



 

 

  



  

  

 

 


  
  
Template Sequence  SRKIAVVRGVIYGLITLAEAKQTYGLSDEEFNSWVS
Template Known Secondary structure  TT

TT
SS
Template Predicted Secondary structure 







Template SS confidence 



































   37..40.........50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions