 |
Job Description | P0CF64 | Confidence | 81.72% | Date | Thu Jan 5 11:31:22 GMT 2012 |
Rank | 332 | Aligned Residues | 66 |
% Identity | 8% | Template | d1q06a_ |
SCOP info | Putative DNA-binding domain
| Putative DNA-binding domain
| DNA-binding N-terminal domain of transcription activators
|
Resolution | 2.07 |
|
 |
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | G | V | S | L | V | S | R | C | L | R | V | S | R | A | Q | L | H | V | I | L | R | R | T | . |
. |
. |
D | D | W | M | D | G | R | R | S | R | H | T | D | D | T | D | V | L | L | R | I | H | H | V | I | G | E | L | P | T | Y | G | Y | R | R | V | W | A | L | L | R | R |
Query Conservation |   |
  |
|   |   |   |
|
|   |   |   |
|
|
|
|   |
|   |
|   |   |   |   |
|   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |   |   |
|
|
|   |   |
|
|
|   |
|
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |
Template Sequence |   |
M | N | I | S | D | V | A | K | I | T | G | L | T | S | K | A | I | R | F | Y | E | E | K | G | L | V | T | P | P | M | R | S | E | N | G | Y | R | T | Y | T | Q | Q | H | L | N | E | L | T | L | L | R | Q | A | R | Q | V | G | F | N | L | E | E | S | G | E | L | V | N | L |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  | T | T |
| S |
|
|
|  |  |
| T | T | S |
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|