Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF64
Confidence63.39%DateThu Jan 5 11:31:22 GMT 2012
Rank409Aligned Residues39
% Identity10%Templatec3r0aB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196)
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10........ .20.........30.........40
Predicted Secondary structure 




...





Query SS confidence 
















. . .





















Query Sequence  WTGKKVDSARALIARGW. . . GVSLVSRCLRVSRAQLHVILRR
Query Conservation             
   
 ...
   

   



 
 
    
Alig confidence 
















...





















Template Conservation 

  
  

  
       

  


  
  
   


 
  
Template Sequence  LTKADLNVXKSFLNEPDRWIDTDALSKSLKLDVSTVQRSVKK
Template Known Secondary structure 

STT

B
TT

Template Predicted Secondary structure 











Template SS confidence 









































   21........30.........40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions